Detailed information NTG0319395

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C12_RS07925
• Genome accession: NZ_CP032857
• Coordinates: 1521011..1521964 (+)
• Length: 317 a.a.
• NCBI ID: WP_069837427.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain 2RL2-3
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1516011..1526964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C12_RS07895 (D9C12_07895)	argF	1516552..1517511 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
D9C12_RS07905 (D9C12_07905)	yjzC	1518887..1519066 (+)	180	WP_003245356.1	YjzC family protein	-
D9C12_RS07910 (D9C12_07910)	yjzD	1519113..1519298 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C12_RS07915 (D9C12_07915)	-	1519547..1520281 (+)	735	WP_014479433.1	hypothetical protein	-
D9C12_RS07920 (D9C12_07920)	-	1520363..1520920 (+)	558	WP_014479435.1	hypothetical protein	-
D9C12_RS07925 (D9C12_07925)	med	1521011..1521964 (+)	954	WP_069837427.1	transcriptional regulator Med	Regulator
D9C12_RS07930 (D9C12_07930)	comZ	1521979..1522170 (+)	192	WP_046380930.1	ComG operon transcriptional repressor ComZ	Regulator
D9C12_RS07935 (D9C12_07935)	yjzB	1522200..1522439 (-)	240	WP_003232972.1	spore coat protein YjzB	-
D9C12_RS07940 (D9C12_07940)	fabH	1522604..1523542 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C12_RS07945 (D9C12_07945)	fabF	1523565..1524806 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
D9C12_RS07950 (D9C12_07950)	yjaZ	1524882..1525667 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
D9C12_RS07955 (D9C12_07955)	appD	1525858..1526844 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=319395 D9C12_RS07925 WP_069837427.1 1521011..1521964(+) (med) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319395 D9C12_RS07925 WP_069837427.1 1521011..1521964(+) (med) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997