Detailed information NTG0319355

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C11_RS17725
• Genome accession: NZ_CP032855
• Coordinates: 3315374..3316327 (+)
• Length: 317 a.a.
• NCBI ID: WP_041340417.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain PJ-7
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3310374..3321327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C11_RS17700 (D9C11_17700)	argF	3312206..3313165 (+)	960	WP_121591632.1	ornithine carbamoyltransferase	-
D9C11_RS17705 (D9C11_17705)	yjzC	3313250..3313429 (+)	180	WP_003245356.1	YjzC family protein	-
D9C11_RS17710 (D9C11_17710)	yjzD	3313476..3313661 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C11_RS17715 (D9C11_17715)	-	3313910..3314644 (+)	735	WP_041340422.1	hypothetical protein	-
D9C11_RS17720 (D9C11_17720)	-	3314726..3315283 (+)	558	WP_017695676.1	hypothetical protein	-
D9C11_RS17725 (D9C11_17725)	med	3315374..3316327 (+)	954	WP_041340417.1	transcriptional regulator Med	Regulator
D9C11_RS17730 (D9C11_17730)	comZ	3316342..3316533 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
D9C11_RS17735 (D9C11_17735)	yjzB	3316563..3316790 (-)	228	WP_121591633.1	spore coat protein YjzB	-
D9C11_RS17740 (D9C11_17740)	fabH	3316955..3317893 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C11_RS17745 (D9C11_17745)	fabF	3317916..3319157 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
D9C11_RS17750 (D9C11_17750)	yjaZ	3319233..3320018 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
D9C11_RS17755 (D9C11_17755)	appD	3320210..3321196 (+)	987	WP_121591634.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35282.79 Da
• Isoelectric Point: 4.6031

>NTDB_id=319355 D9C11_RS17725 WP_041340417.1 3315374..3316327(+) (med) [Bacillus subtilis subsp. subtilis strain PJ-7]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIVNAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKSNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319355 D9C11_RS17725 WP_041340417.1 3315374..3316327(+) (med) [Bacillus subtilis subsp. subtilis strain PJ-7]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCGTAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGTAGTGAATATGCTGAGGTGTTTAACCTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGTGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAATCGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGAGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCTAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.054	100	0.991