Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D9C11_RS13460 Genome accession   NZ_CP032855
Coordinates   2518156..2519106 (+) Length   316 a.a.
NCBI ID   WP_087960839.1    Uniprot ID   A0AAX3RML5
Organism   Bacillus subtilis subsp. subtilis strain PJ-7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2513156..2524106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C11_RS13435 (D9C11_13435) rapC 2514604..2515752 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  D9C11_RS13440 (D9C11_13440) phrC 2515736..2515858 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  D9C11_RS13445 (D9C11_13445) yczM 2515958..2516047 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  D9C11_RS13450 (D9C11_13450) yczN 2516129..2516242 (-) 114 WP_032728921.1 YjcZ family sporulation protein -
  D9C11_RS13455 (D9C11_13455) thrD 2516395..2517759 (-) 1365 WP_041340152.1 aspartate kinase -
  D9C11_RS13460 (D9C11_13460) ceuB 2518156..2519106 (+) 951 WP_087960839.1 petrobactin ABC transporter permease YclN Machinery gene
  D9C11_RS13465 (D9C11_13465) yclO 2519099..2520046 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  D9C11_RS13470 (D9C11_13470) yclP 2520040..2520801 (+) 762 WP_121591431.1 petrobactin ABC transporter ATP-binding protein YclP -
  D9C11_RS13475 (D9C11_13475) yclQ 2520823..2521776 (+) 954 WP_121591432.1 petrobactin ABC transporter substrate-binding protein YclQ -
  D9C11_RS13480 (D9C11_13480) cdaE 2521822..2523240 (-) 1419 WP_069837256.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34889.31 Da        Isoelectric Point: 9.9364

>NTDB_id=319347 D9C11_RS13460 WP_087960839.1 2518156..2519106(+) (ceuB) [Bacillus subtilis subsp. subtilis strain PJ-7]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRMPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=319347 D9C11_RS13460 WP_087960839.1 2518156..2519106(+) (ceuB) [Bacillus subtilis subsp. subtilis strain PJ-7]
ATGAAGCTACGTTACTTATTTATTCTACTTATTATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTATGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAATCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment