Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | D9C11_RS00115 | Genome accession | NZ_CP032855 |
| Coordinates | 12039..13175 (+) | Length | 378 a.a. |
| NCBI ID | WP_121590873.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis strain PJ-7 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 7039..18175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C11_RS00085 (D9C11_00085) | - | 7466..7741 (+) | 276 | Protein_15 | hypothetical protein | - |
| D9C11_RS00090 (D9C11_00090) | - | 7785..9563 (+) | 1779 | WP_121590871.1 | right-handed parallel beta-helix repeat-containing protein | - |
| D9C11_RS00095 (D9C11_00095) | - | 9577..9909 (+) | 333 | WP_071581347.1 | hypothetical protein | - |
| D9C11_RS00100 (D9C11_00100) | - | 10082..11131 (+) | 1050 | WP_121590872.1 | N-acetylmuramoyl-L-alanine amidase | - |
| D9C11_RS00105 (D9C11_00105) | - | 11246..11638 (+) | 393 | WP_017696898.1 | hypothetical protein | - |
| D9C11_RS00110 (D9C11_00110) | - | 11660..11911 (+) | 252 | WP_017696899.1 | phage holin | - |
| D9C11_RS00115 (D9C11_00115) | rapC | 12039..13175 (+) | 1137 | WP_121590873.1 | Rap family tetratricopeptide repeat protein | Regulator |
| D9C11_RS00120 (D9C11_00120) | - | 13165..13341 (+) | 177 | WP_017696901.1 | hypothetical protein | - |
| D9C11_RS00125 (D9C11_00125) | - | 13383..13934 (-) | 552 | Protein_23 | UV damage repair protein UvrX | - |
| D9C11_RS00130 (D9C11_00130) | - | 14038..15849 (-) | 1812 | WP_121590875.1 | reverse transcriptase/maturase family protein | - |
| D9C11_RS00135 (D9C11_00135) | - | 16413..17111 (-) | 699 | Protein_25 | UV damage repair protein UvrX | - |
| D9C11_RS00140 (D9C11_00140) | yolD | 17104..17436 (-) | 333 | WP_121590876.1 | YolD-like family protein | - |
| D9C11_RS00145 (D9C11_00145) | - | 17610..17945 (+) | 336 | WP_041054825.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 44931.21 Da Isoelectric Point: 5.0637
>NTDB_id=319293 D9C11_RS00115 WP_121590873.1 12039..13175(+) (rapC) [Bacillus subtilis subsp. subtilis strain PJ-7]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEIEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPKIS
DLLEKIESNQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMY
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKNALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEIEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPKIS
DLLEKIESNQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMY
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKNALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET
Nucleotide
Download Length: 1137 bp
>NTDB_id=319293 D9C11_RS00115 WP_121590873.1 12039..13175(+) (rapC) [Bacillus subtilis subsp. subtilis strain PJ-7]
TTGGAGCAAATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCAGAAATATTGAAAGCTGAAATTGAGGAAGAAATAAGGCATATGAAGGAAGACCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAATTAATGCTGGATTACCTTGAACCAAAAACAATGAACGAAGAACGACCTAAAATTTCT
GACTTATTAGAAAAGATCGAAAGTAACCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGTGGAAT
GTATGAATTTGAACAATACGAATACCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAGATTGAACGAGCAGAATTCCACTACAAAGTTGCTGAAATTTATTATCATATGAAGCAAACACATATGTCGATGTAC
CACATTGTTCAAGCAATTGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAAATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGATATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGAGATTATGGCAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA
TTGGAGCAAATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCAGAAATATTGAAAGCTGAAATTGAGGAAGAAATAAGGCATATGAAGGAAGACCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAATTAATGCTGGATTACCTTGAACCAAAAACAATGAACGAAGAACGACCTAAAATTTCT
GACTTATTAGAAAAGATCGAAAGTAACCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGTGGAAT
GTATGAATTTGAACAATACGAATACCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAGATTGAACGAGCAGAATTCCACTACAAAGTTGCTGAAATTTATTATCATATGAAGCAAACACATATGTCGATGTAC
CACATTGTTCAAGCAATTGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAAATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGATATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGAGATTATGGCAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
48.294 |
100 |
0.487 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
46.053 |
100 |
0.463 |