Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D9C09_RS05825 Genome accession   NZ_CP032852
Coordinates   1146967..1147917 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis subsp. subtilis strain GFR-12     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1141967..1152917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C09_RS05800 (D9C09_05800) rapC 1143422..1144570 (+) 1149 WP_069837255.1 response regulator aspartate phosphatase RapC Regulator
  D9C09_RS05805 (D9C09_05805) phrC 1144554..1144676 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  D9C09_RS05810 (D9C09_05810) yczM 1144775..1144864 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  D9C09_RS05815 (D9C09_05815) yczN 1144946..1145059 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  D9C09_RS05820 (D9C09_05820) thrD 1145212..1146576 (-) 1365 WP_021481755.1 aspartate kinase -
  D9C09_RS05825 (D9C09_05825) ceuB 1146967..1147917 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  D9C09_RS05830 (D9C09_05830) yclO 1147910..1148857 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  D9C09_RS05835 (D9C09_05835) yclP 1148851..1149609 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  D9C09_RS05840 (D9C09_05840) yclQ 1149631..1150584 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  D9C09_RS05845 (D9C09_05845) cdaE 1150630..1152048 (-) 1419 WP_069837256.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=319159 D9C09_RS05825 WP_014475804.1 1146967..1147917(+) (ceuB) [Bacillus subtilis subsp. subtilis strain GFR-12]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=319159 D9C09_RS05825 WP_014475804.1 1146967..1147917(+) (ceuB) [Bacillus subtilis subsp. subtilis strain GFR-12]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment