Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   D9C09_RS05805 Genome accession   NZ_CP032852
Coordinates   1144554..1144676 (+) Length   40 a.a.
NCBI ID   WP_003224994.1    Uniprot ID   G4NQY6
Organism   Bacillus subtilis subsp. subtilis strain GFR-12     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139554..1149676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C09_RS05790 (D9C09_05790) yclJ 1141167..1141850 (+) 684 WP_003246532.1 two-component system response regulator YclJ -
  D9C09_RS05795 (D9C09_05795) yclK 1141837..1143258 (+) 1422 WP_072557076.1 two-component system sensor histidine kinase YclK -
  D9C09_RS05800 (D9C09_05800) rapC 1143422..1144570 (+) 1149 WP_069837255.1 response regulator aspartate phosphatase RapC Regulator
  D9C09_RS05805 (D9C09_05805) phrC 1144554..1144676 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  D9C09_RS05810 (D9C09_05810) yczM 1144775..1144864 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  D9C09_RS05815 (D9C09_05815) yczN 1144946..1145059 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  D9C09_RS05820 (D9C09_05820) thrD 1145212..1146576 (-) 1365 WP_021481755.1 aspartate kinase -
  D9C09_RS05825 (D9C09_05825) ceuB 1146967..1147917 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  D9C09_RS05830 (D9C09_05830) yclO 1147910..1148857 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  D9C09_RS05835 (D9C09_05835) yclP 1148851..1149609 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4197.98 Da        Isoelectric Point: 8.0285

>NTDB_id=319158 D9C09_RS05805 WP_003224994.1 1144554..1144676(+) (phrC) [Bacillus subtilis subsp. subtilis strain GFR-12]
MKLKSKLFVICLAAAAIFTAAGVSANAEALDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=319158 D9C09_RS05805 WP_003224994.1 1144554..1144676(+) (phrC) [Bacillus subtilis subsp. subtilis strain GFR-12]
ATGAAATTGAAATCTAAGTTGTTTGTTATTTGTTTGGCCGCAGCCGCGATTTTTACAGCGGCTGGCGTTTCTGCTAATGC
GGAAGCACTCGACTTTCATGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment