Detailed information NTG0031899

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AB57_RS18275
• Genome accession: NC_011586
• Coordinates: 3728919..3729401 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046489.1
• Uniprot ID: A0A0J0ZLV7
• Organism: Acinetobacter baumannii AB0057
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3723919..3734401

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB57_RS18240 (AB57_3613)	-	3724030..3725061 (+)	1032	WP_001189459.1	lipase secretion chaperone	-
AB57_RS18245 (AB57_3614)	-	3725176..3726117 (+)	942	WP_085916958.1	lipase family alpha/beta hydrolase	-
AB57_RS18250 (AB57_3615)	rplS	3726169..3726537 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
AB57_RS18255 (AB57_3616)	trmD	3726745..3727485 (-)	741	WP_000464595.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AB57_RS18260 (AB57_3617)	rimM	3727531..3728079 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
AB57_RS18265 (AB57_3618)	rpsP	3728099..3728350 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AB57_RS18270 (AB57_3619)	pilE	3728497..3728922 (-)	426	WP_000788336.1	type IV pilin protein	Machinery gene
AB57_RS18275 (AB57_3620)	pilY2	3728919..3729401 (-)	483	WP_001046489.1	type IV pilin protein	Machinery gene
AB57_RS18280 (AB57_3621)	pilY1	3729412..3733266 (-)	3855	WP_000768943.1	vWA domain-containing protein	Machinery gene
AB57_RS18285 (AB57_3622)	pilX	3733278..3734096 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17657.94 Da
• Isoelectric Point: 8.4737

>NTDB_id=31899 AB57_RS18275 WP_001046489.1 3728919..3729401(-) (pilY2) [Acinetobacter baumannii AB0057]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=31899 AB57_RS18275 WP_001046489.1 3728919..3729401(-) (pilY2) [Acinetobacter baumannii AB0057]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

3D structure

• AlphaFold DB: A0A0J0ZLV7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	96.25	100	0.963
comE	Acinetobacter baylyi ADP1	41.86	100	0.45