Detailed information NTG0318967

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: D5S13_RS02190
• Genome accession: NZ_CP032821
• Coordinates: 442821..443264 (-)
• Length: 147 a.a.
• NCBI ID: WP_220123381.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain JDFM SA01
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 437821..448264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D5S13_RS02140 (D5S13_00415)	-	437932..438180 (-)	249	WP_001126846.1	phi PVL orf 51-like protein	-
D5S13_RS02145 (D5S13_00416)	-	438181..438552 (-)	372	WP_001140289.1	SA1788 family PVL leukocidin-associated protein	-
D5S13_RS02150 (D5S13_00417)	-	438553..438738 (-)	186	WP_001187242.1	DUF3113 family protein	-
D5S13_RS02155 (D5S13_00418)	-	438743..439147 (-)	405	WP_000049784.1	DUF1064 domain-containing protein	-
D5S13_RS02160 (D5S13_00419)	-	439158..439379 (-)	222	WP_001123673.1	DUF3269 family protein	-
D5S13_RS02165 (D5S13_00420)	-	439392..439553 (-)	162	WP_000237153.1	hypothetical protein	-
D5S13_RS02170 (D5S13_00421)	-	439547..440326 (-)	780	WP_000803065.1	ATP-binding protein	-
D5S13_RS02175 (D5S13_00423)	-	440336..441107 (-)	772	Protein_432	conserved phage C-terminal domain-containing protein	-
D5S13_RS02180 (D5S13_00424)	-	441172..442029 (+)	858	WP_000371250.1	DUF4393 domain-containing protein	-
D5S13_RS02185 (D5S13_00426)	-	442135..442809 (-)	675	WP_031899480.1	putative HNHc nuclease	-
D5S13_RS02190 (D5S13_00427)	ssbA	442821..443264 (-)	444	WP_220123381.1	single-stranded DNA-binding protein	Machinery gene
D5S13_RS02195 (D5S13_00428)	-	443261..443911 (-)	651	WP_000840496.1	ERF family protein	-
D5S13_RS02200 (D5S13_00429)	-	443912..444448 (-)	537	WP_001004336.1	host-nuclease inhibitor Gam family protein	-
D5S13_RS02205 (D5S13_00430)	-	444461..444721 (-)	261	WP_000291076.1	DUF1108 family protein	-
D5S13_RS02210 (D5S13_00431)	-	444815..444976 (-)	162	WP_000066020.1	DUF1270 domain-containing protein	-
D5S13_RS02215 (D5S13_00432)	-	444969..445190 (-)	222	WP_000977381.1	hypothetical protein	-
D5S13_RS02220 (D5S13_00433)	-	445261..445926 (+)	666	WP_031764600.1	hypothetical protein	-
D5S13_RS02225	-	445947..446015 (-)	69	Protein_442	hypothetical protein	-
D5S13_RS02230 (D5S13_00434)	tscA	446055..446279 (-)	225	WP_000187184.1	type II toxin-antitoxin system antitoxin TscA	-
D5S13_RS02235 (D5S13_00435)	-	446280..447059 (-)	780	WP_001148557.1	phage antirepressor	-
D5S13_RS02240 (D5S13_00436)	-	447116..447325 (+)	210	WP_000642492.1	hypothetical protein	-
D5S13_RS02245 (D5S13_00437)	-	447315..447458 (-)	144	WP_000939498.1	hypothetical protein	-

Sequence

Protein

• Length: 147 a.a.
• Molecular weight: 16326.90 Da
• Isoelectric Point: 5.1086

>NTDB_id=318967 D5S13_RS02190 WP_220123381.1 442821..443264(-) (ssbA) [Staphylococcus aureus strain JDFM SA01]
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVVFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQNNSYNAPQNRQQSNNPFANANGPIEISDDDLPF

Nucleotide

• Length: 444 bp

>NTDB_id=318967 D5S13_RS02190 WP_220123381.1 442821..443264(-) (ssbA) [Staphylococcus aureus strain JDFM SA01]
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGTATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTGTTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGAATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (1-100)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	41.279	100	0.483
ssb	Latilactobacillus sakei subsp. sakei 23K	38.235	100	0.442