Detailed information NTG0031856

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: AFLV_RS13500
• Genome accession: NC_011567
• Coordinates: 2570333..2571673 (-)
• Length: 446 a.a.
• NCBI ID: WP_012576084.1
• Uniprot ID: -
• Organism: Anoxybacillus flavithermus WK1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2565333..2576673

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AFLV_RS13495 (Aflv_2593)	-	2569668..2570336 (-)	669	WP_012576083.1	ComF family protein	-
AFLV_RS13500 (Aflv_2594)	comFA	2570333..2571673 (-)	1341	WP_012576084.1	DEAD/DEAH box helicase	Machinery gene
AFLV_RS13505 (Aflv_2595)	-	2571740..2572582 (-)	843	WP_012576085.1	DegV family protein	-
AFLV_RS15345 (Aflv_2596)	-	2572779..2573258 (-)	480	WP_244374828.1	RNA-guided endonuclease TnpB family protein	-
AFLV_RS15950	-	2573215..2573358 (-)	144	WP_244374814.1	hypothetical protein	-
AFLV_RS13515 (Aflv_2598)	-	2573535..2574215 (-)	681	WP_041639069.1	response regulator transcription factor	-
AFLV_RS13520 (Aflv_2599)	-	2574239..2575375 (-)	1137	WP_041639071.1	sensor histidine kinase	-
AFLV_RS13525 (Aflv_2600)	-	2575569..2576207 (+)	639	WP_012576090.1	YigZ family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50331.40 Da
• Isoelectric Point: 8.8919

>NTDB_id=31856 AFLV_RS13500 WP_012576084.1 2570333..2571673(-) (comFA) [Anoxybacillus flavithermus WK1]
MICLSLVGKQLLKSELSFSYDAEHVQIIESIVKTKKGYRCVRCNNDDQQLFASFPCACCGRLCTYCRKCIMMGRCSECNP
LVIWIGPTPSTSFSSPLQWNGQLSPAQQMASDEVCRAIERNDDLLVWAVCGAGKTEVLFAGIDMALSHGKRVCIAAPRTD
VVLELAPRLASVFPSVDMAALYGGSQDRGKLASLTVTTTHQLLRYYHAFDVMIVDEVDAFPYSVEPMLAYAVERARKPTS
ALIYLTATPNEQWQREVKSGKRKAVTIPARYHRRPLPVPTFEWCGNWQKKWCNQRLPSCVVQWVNEHLERNKQAFLFVPH
INFLQQVVPYFQQFHPRIEGVHAEDPKRKEKVLAFRRGQIPLLVTTTILERGVTVPNIDVAVLGAEQPIFTESALVQIAG
RVGRSAQYPTGDVRFFHFGKTKAMIAAKRHIVRMNDEARKRGLLDE

Nucleotide

• Length: 1341 bp

>NTDB_id=31856 AFLV_RS13500 WP_012576084.1 2570333..2571673(-) (comFA) [Anoxybacillus flavithermus WK1]
GTGATTTGTTTGTCTCTTGTTGGGAAACAGCTGTTAAAGTCTGAACTTTCTTTTTCCTATGATGCGGAGCATGTTCAAAT
CATTGAAAGTATCGTCAAAACGAAAAAAGGTTATCGTTGTGTTCGGTGCAATAACGATGACCAACAGCTTTTTGCTTCTT
TCCCATGTGCCTGTTGTGGTCGCCTATGCACGTATTGTCGAAAATGTATAATGATGGGACGATGTAGCGAATGCAATCCG
CTCGTCATTTGGATTGGACCCACTCCTTCGACCTCTTTTTCTTCACCGCTACAATGGAACGGTCAATTATCTCCAGCACA
ACAAATGGCTTCCGACGAAGTTTGCCGAGCCATTGAACGAAACGACGATTTACTTGTCTGGGCAGTATGTGGAGCAGGGA
AAACAGAAGTATTATTCGCAGGAATTGATATGGCGCTGTCGCACGGAAAGCGCGTTTGCATTGCTGCTCCGCGCACCGAT
GTTGTATTAGAGCTAGCGCCGCGTTTGGCGAGTGTATTTCCATCGGTCGATATGGCGGCATTATATGGCGGCAGCCAAGA
CCGTGGTAAACTTGCTTCATTGACGGTGACGACGACACATCAGTTGCTTCGCTATTATCACGCTTTTGATGTGATGATTG
TCGATGAAGTGGATGCGTTTCCGTATAGCGTTGAGCCAATGCTTGCATATGCTGTTGAACGCGCCCGAAAACCGACATCT
GCACTTATTTATTTAACCGCCACGCCAAACGAACAATGGCAACGTGAAGTAAAAAGCGGAAAACGAAAAGCGGTGACGAT
TCCTGCGCGCTATCATCGCCGTCCGCTTCCTGTCCCGACATTTGAATGGTGCGGAAATTGGCAAAAAAAGTGGTGTAATC
AACGTTTGCCTTCCTGTGTCGTGCAATGGGTAAACGAGCATCTCGAAAGAAACAAACAAGCGTTTTTATTCGTTCCTCAC
ATCAACTTTTTACAACAAGTTGTTCCGTATTTCCAACAATTTCATCCGCGCATTGAAGGCGTGCACGCCGAAGATCCAAA
ACGAAAAGAGAAAGTGCTTGCGTTTCGACGTGGGCAAATTCCGCTGCTTGTCACAACGACTATTTTAGAACGAGGCGTAA
CAGTACCAAATATTGATGTAGCTGTATTAGGTGCAGAACAACCGATTTTTACAGAAAGCGCGCTCGTGCAAATCGCAGGA
CGCGTCGGGCGAAGTGCTCAGTATCCGACAGGTGATGTCCGTTTTTTTCATTTTGGAAAAACGAAAGCGATGATCGCCGC
CAAGCGTCATATTGTACGCATGAACGATGAAGCACGAAAGCGAGGGTTGCTTGACGAATGA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (102-250)

• Helicase conserved C-terminal domain (Helicase_C) (306-405)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.919	99.327	0.516
comFA	Latilactobacillus sakei subsp. sakei 23K	39.278	99.327	0.39