Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LPA65_RS08135 Genome accession   NZ_CP032751
Coordinates   1717333..1718610 (-) Length   425 a.a.
NCBI ID   WP_057716937.1    Uniprot ID   -
Organism   Lactiplantibacillus argentoratensis strain DSM 16365     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1712333..1723610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPA65_RS08130 (LPA65_08130) - 1715584..1717293 (-) 1710 WP_057716938.1 proline--tRNA ligase -
  LPA65_RS08135 (LPA65_08135) eeP 1717333..1718610 (-) 1278 WP_057716937.1 RIP metalloprotease RseP Regulator
  LPA65_RS08140 (LPA65_08140) - 1718648..1719433 (-) 786 WP_054396552.1 phosphatidate cytidylyltransferase -
  LPA65_RS08145 (LPA65_08145) - 1719449..1720228 (-) 780 WP_057716936.1 isoprenyl transferase -
  LPA65_RS08150 (LPA65_08150) frr 1720348..1720911 (-) 564 WP_003640736.1 ribosome recycling factor -
  LPA65_RS08155 (LPA65_08155) pyrH 1720913..1721635 (-) 723 WP_003640737.1 UMP kinase -
  LPA65_RS08160 (LPA65_08160) tsf 1721835..1722713 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45862.40 Da        Isoelectric Point: 9.9302

>NTDB_id=318524 LPA65_RS08135 WP_057716937.1 1717333..1718610(-) (eeP) [Lactiplantibacillus argentoratensis strain DSM 16365]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQVGSDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKRYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTANSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLNLTIKRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=318524 LPA65_RS08135 WP_057716937.1 1717333..1718610(-) (eeP) [Lactiplantibacillus argentoratensis strain DSM 16365]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTCTATTTTGC
CAAAAAGGCTGGGATCCTAGTGCGTGAATTTTCTGTCGGGATGGGACCCAAGGCGGTCGCGTTTCGTCGTAATGCCACGA
CTTATACGTTGCGGTTTCTGCCAATCGGTGGTTACGTGCGAATGGCCGGCGTGGCTGACGATGAGGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTACAAGTTGGTTCAGATGGAATTGTTCATTCAATCAATGCTAGTAAGAAGACGACGTTGTT
CAATGGTATTCCGCTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAGGGTTATGAGAACGGAGACGAGA
GTGAAGTCAAACGATACGCCGTTGACCATGACGCGACGATCGTCGAAAGTGATGGTACCGAGGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGCTATGGCAACGCATGCTGACCAATTTTGCCGGCCCGATGAATAACTTCATCTTGGC
CATCATTACGTTTGCAATTCTGGCCTTTATGCAGGGTGGCGTTACGAGTACAACGACGCACGTTGCGGCGACGACAGCAA
ACTCAGTTGCCCGTACGGCTGGCATCCAAAAAGGCGATCAAATCGTGGCGGTTAACGGTAAAAAGATGACGAGTGCTCAG
TCGATTTCGCTGTTGATTCAAGATAGTCCGAAACAACGGTTGAACCTGACCATCAAAAGAGCTGGTCAGACCAAAAAAAT
CGCGGTGACCCCCGCTGCTAAGACGGTCTCTGGTAACCGAATCGGCCAAATCGGGGTCCAATGGGCGACCAAGACCGACA
CGAGCCTGGGAGCCAAGTTAGCATACGGCTTTACTGGTTCATGGGGAATCACCAAGCAGATTTTTCAAGTGCTCGGTCGG
ATGGTCACGCACGGTTTTAGTTTGAACGATTTAGGCGGGCCGGTGGCGATTTTTGCGACGACCTCTCAAGCCGCTAAGTC
CGGGGTGCGTACGGTGATCTATTTACTCGCTGTATTGTCGATCAACCTTGGAATTGTTAATTTATTACCAATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTTCGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(210-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494

  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494


Multiple sequence alignment