Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   D8N35_RS09650 Genome accession   NZ_CP032739
Coordinates   1937334..1938602 (+) Length   422 a.a.
NCBI ID   WP_121260912.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain EC-369     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1932334..1943602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8N35_RS09625 (D8N35_09625) tsf 1933079..1933960 (+) 882 WP_005229432.1 translation elongation factor Ts -
  D8N35_RS09630 (D8N35_09630) pyrH 1934108..1934830 (+) 723 WP_005229433.1 UMP kinase -
  D8N35_RS09635 (D8N35_09635) frr 1934832..1935389 (+) 558 WP_121260910.1 ribosome recycling factor -
  D8N35_RS09640 (D8N35_09640) - 1935581..1936381 (+) 801 WP_015510051.1 isoprenyl transferase -
  D8N35_RS09645 (D8N35_09645) - 1936378..1937184 (+) 807 WP_010749318.1 phosphatidate cytidylyltransferase -
  D8N35_RS09650 (D8N35_09650) eeP 1937334..1938602 (+) 1269 WP_121260912.1 RIP metalloprotease RseP Regulator
  D8N35_RS09655 (D8N35_09655) - 1938672..1940381 (+) 1710 WP_005229438.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45503.77 Da        Isoelectric Point: 4.4488

>NTDB_id=318417 D8N35_RS09650 WP_121260912.1 1937334..1938602(+) (eeP) [Enterococcus casseliflavus strain EC-369]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAMTYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQIALAVKRGSETLDLTATPESQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGLRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=318417 D8N35_RS09650 WP_121260912.1 1937334..1938602(+) (eeP) [Enterococcus casseliflavus strain EC-369]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTAGTGGTAGTGATTCACGAGTTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTTCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACAGGGTTCATCAATGGCAATGAACAAG
AAGCGATGACGTACGCTGTGGATCATGATGCAACGATCATCCATGAAGATGGCGTTGAAGTTCGGATCGCACCTAAAGAC
GTTCAATTCCAGTCCGCAAAGCTTTGGCAGCGAATGCTGACGAATTTTGCTGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGTGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCAGGGCTGCAAAATGGCGATGAAATCTTAGCTGTCGAAGGTGTCGATGTTTCTAACTGGTCA
GAATTAACGACTGAGATCCAAAAGTACCCGGATACTCAGATTGCTCTAGCAGTCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGAGAGTCAAGAATCAGGGGAGACCACGATTGGTTTCTTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGCGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCTGCATCGCAAGGGGTAAC
AACGGTGATCGCGATGATGGCGATGATTTCTATCAACTTGGGGATCTTTAATTTATTACCGATTCCTGGATTGGATGGCG
GTAAGCTGGTTTTAAATATTTTAGAAGGTTTGCGAGGCAAGCCAATCAGCCAAGAAAAAGAAGGCATCATTACTCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(207-260)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

52.225

100

0.528
  eeP Streptococcus thermophilus LMG 18311

51.288

100

0.519

Multiple sequence alignment