Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | E8M03_RS10975 | Genome accession | NZ_CP039448 |
| Coordinates | 2171964..2172359 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | Q2FWF7 |
| Organism | Staphylococcus aureus strain VGC1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2166964..2177359
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E8M03_RS10950 (E8M03_11060) | thiE | 2167562..2168203 (-) | 642 | WP_000483147.1 | thiamine phosphate synthase | - |
| E8M03_RS10955 (E8M03_11065) | thiM | 2168205..2168996 (-) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| E8M03_RS10960 (E8M03_11070) | thiD | 2168980..2169810 (-) | 831 | WP_000594943.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E8M03_RS10965 (E8M03_11075) | tenA | 2169803..2170492 (-) | 690 | WP_000396067.1 | thiaminase II | - |
| E8M03_RS10970 (E8M03_11080) | sceD | 2170880..2171575 (-) | 696 | WP_000751998.1 | lytic transglycosylase SceD | - |
| E8M03_RS10975 (E8M03_11085) | ssb | 2171964..2172359 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| E8M03_RS10980 (E8M03_11090) | istB | 2172502..2173263 (-) | 762 | WP_001066124.1 | IS21-like element helper ATPase IstB | - |
| E8M03_RS10985 (E8M03_11095) | istA | 2173256..2174548 (-) | 1293 | WP_000777467.1 | IS21 family transposase | - |
| E8M03_RS10990 (E8M03_11100) | - | 2174759..2175199 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| E8M03_RS10995 (E8M03_11105) | fabZ | 2175256..2175696 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| E8M03_RS11000 (E8M03_11110) | murA | 2175730..2176995 (-) | 1266 | WP_000358002.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| E8M03_RS11005 (E8M03_11115) | - | 2177106..2177339 (-) | 234 | WP_000384520.1 | DUF1146 family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=317758 E8M03_RS10975 WP_000932694.1 2171964..2172359(-) (ssb) [Staphylococcus aureus strain VGC1]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=317758 E8M03_RS10975 WP_000932694.1 2171964..2172359(-) (ssb) [Staphylococcus aureus strain VGC1]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |