Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CFK76_RS02390 | Genome accession | NZ_CP032652 |
| Coordinates | 466949..467254 (+) | Length | 101 a.a. |
| NCBI ID | WP_016265375.1 | Uniprot ID | A0A9N7J126 |
| Organism | Latilactobacillus sakei strain LZ217 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 461949..472254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFK76_RS02355 (CFK76_02355) | - | 462442..462816 (-) | 375 | WP_011375004.1 | hypothetical protein | - |
| CFK76_RS02360 (CFK76_02360) | - | 462913..463413 (+) | 501 | WP_016265379.1 | VanZ family protein | - |
| CFK76_RS02365 (CFK76_02365) | - | 463504..464235 (+) | 732 | WP_011375002.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CFK76_RS02370 (CFK76_02370) | comGA | 464352..465242 (+) | 891 | WP_025016380.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CFK76_RS02375 (CFK76_02375) | comGB | 465235..466242 (+) | 1008 | WP_061827023.1 | type II secretion system F family protein | Machinery gene |
| CFK76_RS02380 (CFK76_02380) | comGC | 466239..466538 (+) | 300 | WP_025016383.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CFK76_RS02385 (CFK76_02385) | comGD | 466558..466962 (+) | 405 | WP_235596237.1 | hypothetical protein | Machinery gene |
| CFK76_RS02390 (CFK76_02390) | comGE | 466949..467254 (+) | 306 | WP_016265375.1 | hypothetical protein | Machinery gene |
| CFK76_RS02395 (CFK76_02395) | comGF | 467229..467741 (+) | 513 | WP_035145013.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CFK76_RS02400 (CFK76_02400) | - | 467704..468042 (+) | 339 | WP_035145011.1 | hypothetical protein | - |
| CFK76_RS02405 (CFK76_02405) | - | 468157..469176 (+) | 1020 | WP_235596233.1 | class I SAM-dependent methyltransferase | - |
| CFK76_RS02410 (CFK76_02410) | - | 469198..470394 (+) | 1197 | WP_011374993.1 | acetate/propionate family kinase | - |
| CFK76_RS02415 (CFK76_02415) | - | 470449..470907 (+) | 459 | WP_035145008.1 | hypothetical protein | - |
| CFK76_RS02425 (CFK76_02425) | - | 471450..471815 (-) | 366 | WP_011374991.1 | DUF805 domain-containing protein | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 11439.42 Da Isoelectric Point: 11.1577
>NTDB_id=317585 CFK76_RS02390 WP_016265375.1 466949..467254(+) (comGE) [Latilactobacillus sakei strain LZ217]
MFRSRPAFSLVENIIALTLVLGACWLLTVSLLHFKQQQTLKQQQVAQQAVLAMAAEQLRAHQTVKKRWQMGRTIYTVTAN
QQKLKITTKAGESVAINWTTD
MFRSRPAFSLVENIIALTLVLGACWLLTVSLLHFKQQQTLKQQQVAQQAVLAMAAEQLRAHQTVKKRWQMGRTIYTVTAN
QQKLKITTKAGESVAINWTTD
Nucleotide
Download Length: 306 bp
>NTDB_id=317585 CFK76_RS02390 WP_016265375.1 466949..467254(+) (comGE) [Latilactobacillus sakei strain LZ217]
ATGTTCAGAAGTAGGCCGGCTTTTTCACTCGTTGAAAATATCATCGCCTTAACCTTGGTATTAGGGGCTTGCTGGCTATT
AACGGTAAGTCTACTACACTTTAAGCAACAACAAACGCTTAAACAACAGCAAGTTGCACAACAGGCGGTTCTAGCAATGG
CCGCTGAGCAGTTGAGAGCGCATCAGACAGTGAAAAAACGCTGGCAAATGGGGCGAACAATCTATACGGTGACGGCTAAT
CAGCAGAAATTAAAGATAACCACAAAGGCAGGTGAGTCGGTTGCGATTAATTGGACGACCGATTAA
ATGTTCAGAAGTAGGCCGGCTTTTTCACTCGTTGAAAATATCATCGCCTTAACCTTGGTATTAGGGGCTTGCTGGCTATT
AACGGTAAGTCTACTACACTTTAAGCAACAACAAACGCTTAAACAACAGCAAGTTGCACAACAGGCGGTTCTAGCAATGG
CCGCTGAGCAGTTGAGAGCGCATCAGACAGTGAAAAAACGCTGGCAAATGGGGCGAACAATCTATACGGTGACGGCTAAT
CAGCAGAAATTAAAGATAACCACAAAGGCAGGTGAGTCGGTTGCGATTAATTGGACGACCGATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Latilactobacillus sakei subsp. sakei 23K |
99.01 |
100 |
0.99 |