Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   D7D53_RS07575 Genome accession   NZ_CP032621
Coordinates   1521119..1522156 (-) Length   345 a.a.
NCBI ID   WP_120770611.1    Uniprot ID   A0A387BCJ1
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1516119..1527156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS07550 (D7D53_07550) endA 1517387..1518211 (-) 825 WP_120770609.1 DNA-entry nuclease EndA Machinery gene
  D7D53_RS07555 (D7D53_07555) - 1518250..1518438 (-) 189 WP_004241151.1 DNA-directed RNA polymerase subunit beta -
  D7D53_RS07560 (D7D53_07560) murA 1518431..1519714 (-) 1284 WP_120770610.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  D7D53_RS07565 (D7D53_07565) - 1519726..1520769 (-) 1044 WP_004260556.1 acyltransferase family protein -
  D7D53_RS07570 (D7D53_07570) - 1520831..1521061 (-) 231 WP_004260552.1 DUF1146 family protein -
  D7D53_RS07575 (D7D53_07575) sepM 1521119..1522156 (-) 1038 WP_120770611.1 SepM family pheromone-processing serine protease Regulator
  D7D53_RS07580 (D7D53_07580) coaD 1522140..1522628 (-) 489 WP_120770612.1 pantetheine-phosphate adenylyltransferase -
  D7D53_RS07585 (D7D53_07585) rsmD 1522618..1523157 (-) 540 WP_120770613.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  D7D53_RS07590 (D7D53_07590) asnA 1523222..1524214 (-) 993 WP_049551838.1 aspartate--ammonia ligase -
  D7D53_RS07600 (D7D53_07600) - 1524326..1525009 (-) 684 WP_120770614.1 Bax inhibitor-1/YccA family protein -
  D7D53_RS07605 (D7D53_07605) - 1525064..1525804 (-) 741 WP_120770615.1 TrmH family RNA methyltransferase -
  D7D53_RS07610 (D7D53_07610) - 1525838..1526116 (+) 279 WP_033681252.1 acylphosphatase -
  D7D53_RS07615 (D7D53_07615) yidC 1526194..1527120 (+) 927 WP_020901995.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.51 Da        Isoelectric Point: 4.8665

>NTDB_id=317208 D7D53_RS07575 WP_120770611.1 1521119..1522156(-) (sepM) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MKKKIRWPLYVIAALIATFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQISDPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=317208 D7D53_RS07575 WP_120770611.1 1521119..1522156(-) (sepM) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATAGCGACTTTCTTGGCATTTGTAGTGCCCTTGCC
CTACTATATAGAAGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GGGCCTATCAATTCGTTACGGTTGGTGTCCAGCACGCTACTTTAGCCCATATGATTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGCCCAAGAGACTACAGGTGGCTCTTCTGATGTTGAATTTATGCGGATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGGCTAAAAACAGCTGGTAAGGATATTGAACTAAAATATCTTGGGGTTTATGTTT
TGACTGTGACGGATAATTCGACCTTTAAAGGGATTCTCAACATCTCTGATACGGTCACAGCAGTCAATGATCAGACATTC
GACAGTTCCAAAGACTTGATTGATTACGTCAATTCTCAAAAACTAGGGGACTCCGTCAAGGTGACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGTAAGATTATTACCTTGGAAAATGGCAAAAATGGAATTGGAATTGGCTTGATTGACCGTA
CAGAAGTGACCAGTGATGTCCCAATTCGCTTTTCAACAGCCGGTATCGGCGGACCAAGTGCTGGTCTCATGTTTAGTCTG
GCCATCTATACCCAGATATCTGACCCTGGCCTTCGAAATGGCCGTATCGTTGCCGGTACAGGAACCATTGACCGCGATGG
GAATGTGGGGGACATTGGAGGTATTGATAAGAAAGTTGTAGCTTCGGCTAGAGAAGGTGCTGCTATTTTCTTTGCTCCAG
ATAACCCTGTTAGCGAAGAAGAACAAAAAGCACATCCTGATGCGAAAAACAACTACCAAACAGCCCTAGAAGCAGCTAAA
ACAATCAAGACAGATATGAAAATCGTGCCAGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A387BCJ1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment