Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   D7D53_RS07105 Genome accession   NZ_CP032621
Coordinates   1424947..1425678 (-) Length   243 a.a.
NCBI ID   WP_120770562.1    Uniprot ID   A0A387B5F5
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1419947..1430678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS07075 (D7D53_07075) blpC 1420600..1420755 (+) 156 WP_050390357.1 quorum-sensing system pheromone BlpC -
  D7D53_RS07080 (D7D53_07080) - 1420798..1422138 (-) 1341 WP_120770558.1 sensor histidine kinase -
  D7D53_RS07085 (D7D53_07085) comE/blpR 1422152..1422889 (-) 738 WP_120770559.1 response regulator transcription factor Regulator
  D7D53_RS07090 (D7D53_07090) - 1422894..1423232 (-) 339 WP_120770560.1 LytTR family DNA-binding domain-containing protein -
  D7D53_RS07095 (D7D53_07095) - 1423509..1423838 (+) 330 WP_049510125.1 hypothetical protein -
  D7D53_RS07100 (D7D53_07100) - 1423901..1424950 (-) 1050 WP_120770561.1 ABC transporter permease -
  D7D53_RS07105 (D7D53_07105) pptA 1424947..1425678 (-) 732 WP_120770562.1 ABC transporter ATP-binding protein Regulator
  D7D53_RS07110 (D7D53_07110) - 1425746..1426156 (+) 411 WP_120770563.1 HIT family protein -
  D7D53_RS07115 (D7D53_07115) - 1426166..1426453 (+) 288 WP_120770564.1 hypothetical protein -
  D7D53_RS07120 (D7D53_07120) dnaJ 1426479..1427615 (-) 1137 WP_120770565.1 molecular chaperone DnaJ -
  D7D53_RS07125 (D7D53_07125) - 1427940..1428254 (-) 315 WP_120770566.1 hypothetical protein -
  D7D53_RS07130 (D7D53_07130) dnaK 1428307..1430130 (-) 1824 WP_000034661.1 molecular chaperone DnaK -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27141.61 Da        Isoelectric Point: 4.6989

>NTDB_id=317201 D7D53_RS07105 WP_120770562.1 1424947..1425678(-) (pptA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGSININGLTLQEDATNYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLRESFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=317201 D7D53_RS07105 WP_120770562.1 1424947..1425678(-) (pptA) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTCCATGTCCCTGTCTTGAAAGATGTGTCCTTTACCGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGAAAATCAACGACAATCAATGAGATTATCGGTCTGTTGACACCTT
ATAGTGGCTCCATCAATATTAATGGCCTGACCCTGCAAGAAGATGCAACGAACTATCGCAAGCAAATTGGCTACATTCCT
GAGACACCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCCATGGCTTATGGTATTGAGCAGAA
AGTGGCTTTTGATCGAGTGGAGCCTTTGCTAAAAATGTTCCGTTTGGACCAGAAATTAGACTGGTTTCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGTTGGCTATTGCAGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAGGGTAAGTCCATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCTAAGG
GAAATCTCCTGCAACTGCGCGAATCCTTTGACATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A387B5F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.199

99.177

0.716
  pptA Streptococcus thermophilus LMD-9

71.369

99.177

0.708

Multiple sequence alignment