Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   D7D53_RS00240 Genome accession   NZ_CP032621
Coordinates   48720..50489 (+) Length   589 a.a.
NCBI ID   WP_120769765.1    Uniprot ID   A0A387B170
Organism   Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
ICE 43164..78791 48720..50489 within 0


Gene organization within MGE regions


Location: 43164..78791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D53_RS00215 (D7D53_00215) recA 43912..45066 (+) 1155 WP_070479987.1 recombinase RecA Machinery gene
  D7D53_RS00220 (D7D53_00220) - 45181..46551 (+) 1371 WP_120769762.1 MATE family efflux transporter -
  D7D53_RS00225 (D7D53_00225) - 46648..47364 (+) 717 WP_023940351.1 YebC/PmpR family DNA-binding transcriptional regulator -
  D7D53_RS00230 (D7D53_00230) - 47414..48061 (-) 648 WP_120769763.1 DUF308 domain-containing protein -
  D7D53_RS00235 (D7D53_00235) - 48275..48745 (+) 471 WP_120769764.1 MarR family winged helix-turn-helix transcriptional regulator -
  D7D53_RS00240 (D7D53_00240) rcrP 48720..50489 (+) 1770 WP_120769765.1 ABC transporter ATP-binding protein Regulator
  D7D53_RS00245 (D7D53_00245) rcrQ 50479..52239 (+) 1761 WP_120769766.1 ABC transporter ATP-binding protein Regulator
  D7D53_RS00250 (D7D53_00250) - 52335..52838 (+) 504 WP_162927856.1 phosphatase PAP2 family protein -
  D7D53_RS00255 (D7D53_00255) - 52952..53398 (+) 447 WP_120769768.1 LytTR family DNA-binding domain-containing protein -
  D7D53_RS00260 (D7D53_00260) - 53403..54077 (+) 675 WP_120769769.1 LiaF transmembrane domain-containing protein -
  D7D53_RS00265 (D7D53_00265) - 54198..54566 (+) 369 WP_033681017.1 hypothetical protein -
  D7D53_RS00270 (D7D53_00270) - 54690..54872 (+) 183 WP_009729741.1 hypothetical protein -
  D7D53_RS00275 (D7D53_00275) - 54872..55996 (+) 1125 WP_033681018.1 replication initiator protein A -
  D7D53_RS09965 - 55990..56157 (+) 168 WP_000910110.1 hypothetical protein -
  D7D53_RS00280 (D7D53_00280) - 56162..56428 (+) 267 WP_033681019.1 hypothetical protein -
  D7D53_RS10255 - 56451..56585 (+) 135 WP_265182510.1 hypothetical protein -
  D7D53_RS00285 (D7D53_00285) - 56588..56803 (+) 216 WP_033681021.1 helix-turn-helix transcriptional regulator -
  D7D53_RS00290 (D7D53_00290) - 57094..57396 (+) 303 WP_033681022.1 hypothetical protein -
  D7D53_RS00295 (D7D53_00295) - 57415..58197 (+) 783 WP_033681023.1 LPXTG cell wall anchor domain-containing protein -
  D7D53_RS00300 (D7D53_00300) - 58216..61245 (+) 3030 WP_120769770.1 SspB-related isopeptide-forming adhesin -
  D7D53_RS00305 (D7D53_00305) - 61309..61809 (+) 501 WP_033681025.1 hypothetical protein -
  D7D53_RS00310 (D7D53_00310) - 61883..62107 (+) 225 WP_000340303.1 hypothetical protein -
  D7D53_RS00315 (D7D53_00315) - 62135..62884 (+) 750 WP_033681026.1 hypothetical protein -
  D7D53_RS00320 (D7D53_00320) - 62926..64038 (+) 1113 WP_033681027.1 hypothetical protein -
  D7D53_RS00325 (D7D53_00325) - 64100..64321 (+) 222 WP_001047223.1 hypothetical protein -
  D7D53_RS00330 (D7D53_00330) - 64318..64665 (+) 348 WP_000197459.1 PrgI family mobile element protein -
  D7D53_RS00335 (D7D53_00335) - 64625..66979 (+) 2355 WP_033681029.1 VirB4-like conjugal transfer ATPase, CD1110 family -
  D7D53_RS00340 (D7D53_00340) - 67005..69641 (+) 2637 WP_033681031.1 phage tail tip lysozyme -
  D7D53_RS00345 (D7D53_00345) - 69661..70305 (+) 645 WP_033681032.1 hypothetical protein -
  D7D53_RS00350 (D7D53_00350) - 70302..70574 (+) 273 WP_033681033.1 hypothetical protein -
  D7D53_RS00355 (D7D53_00355) - 70528..71367 (+) 840 WP_033681035.1 hypothetical protein -
  D7D53_RS00360 (D7D53_00360) - 71380..71898 (+) 519 WP_033681036.1 hypothetical protein -
  D7D53_RS00365 (D7D53_00365) - 71895..73694 (+) 1800 WP_033681037.1 VirD4-like conjugal transfer protein, CD1115 family -
  D7D53_RS00370 (D7D53_00370) - 73715..73978 (+) 264 WP_000449753.1 hypothetical protein -
  D7D53_RS00375 (D7D53_00375) - 73969..78306 (+) 4338 WP_033681038.1 PBECR4 domain-containing protein -

Sequence


Protein


Download         Length: 589 a.a.        Molecular weight: 65400.71 Da        Isoelectric Point: 6.5210

>NTDB_id=317167 D7D53_RS00240 WP_120769765.1 48720..50489(+) (rcrP) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
MKKLAKRISRKEWGMILLAILFTCFSVYLELEVPTYISKITDLLGSQGTNLDELWQPASMMVGMSFLAFLSAVAVGFFAS
RVAASYTSRLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWA
VLVAVIVNVLMTTVLMTLAFPRQSLIQSLTDKLNSITRESLTGIRVVRAYNAEDYQNDKFAAANDELTRLNLFVNRLMAI
LNPIMMGISSGLSVAIYWIGAYVINDAAPSARLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTMVSAKRINQVLDLH
SSIQNPAQVQQADENLQGQVEFKDVTFRYAANSEAVIEHVSFRAEAGQTVAFIGSTGSGKSTLVNLIPRFYDVSAGEILV
DGVNVQDYDLKDLRNKVGYIPQKAVLFSGDVKGNLDFGHSQETPLSEQAMWQALELAQSKNFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLANNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=317167 D7D53_RS00240 WP_120769765.1 48720..50489(+) (rcrP) [Streptococcus gwangjuensis strain KCOM 1679 (=ChDC B345)]
ATGAAGAAATTAGCCAAACGAATTAGTAGAAAAGAATGGGGGATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGT
CTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTACGGATTTGCTAGGTAGTCAAGGAACTAATTTAGATGAGT
TGTGGCAGCCGGCAAGCATGATGGTGGGAATGTCCTTTCTTGCCTTCTTGTCCGCAGTTGCAGTTGGATTTTTTGCGTCC
AGAGTGGCTGCTTCTTATACTAGTAGGTTGAGAAGCGACATTTTTAACCGAGTTCTAGACTACTCACAGACAGAGATTAA
GAAATTCTCTATTCCCAGTCTTTTAACTCGTACCACCAATGACATTACTCAAGTTCAGATGTTGATTACCATGGGCCTAC
AAGTGGTTACGCGTGGTCCAATTATGGCTATCTGGGCTATCGGGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCC
GTTCTTGTGGCAGTGATTGTCAATGTTTTGATGACGACAGTTTTGATGACGTTAGCCTTTCCAAGACAATCCTTGATTCA
AAGTCTGACTGATAAACTGAACAGTATCACTCGTGAAAGTTTAACAGGTATTCGTGTTGTTCGTGCTTACAATGCAGAAG
ATTACCAAAATGACAAATTTGCAGCAGCAAATGATGAATTGACACGCTTGAATTTGTTTGTAAACCGTCTTATGGCCATT
TTAAATCCCATCATGATGGGGATTTCAAGTGGTTTAAGTGTGGCGATTTACTGGATTGGGGCCTATGTAATCAACGATGC
TGCTCCATCAGCGCGTCTGCCTCTCTTTAGTGACATGGTTGTTTTCATGTCTTATGCCATGCAGGTTGTCATGGGCTTTC
TTCTCATGGGGGCGCTCTTCATTGTACTTCCCCGAACCATGGTATCTGCTAAGCGGATCAATCAGGTTTTAGATTTGCAT
TCGTCTATCCAAAATCCTGCTCAAGTGCAGCAGGCTGATGAAAACCTCCAAGGTCAGGTCGAGTTTAAGGATGTGACCTT
CCGCTATGCGGCAAATTCGGAGGCGGTTATTGAGCATGTTAGCTTTAGAGCAGAAGCTGGTCAAACAGTGGCCTTTATTG
GGTCAACAGGTTCTGGTAAATCAACTTTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGAAATTCTGGTA
GATGGTGTCAATGTTCAAGACTATGACTTGAAAGATTTGCGCAACAAGGTTGGTTATATTCCTCAGAAAGCGGTTCTCTT
TTCAGGTGATGTCAAGGGCAATTTAGATTTTGGGCACAGTCAAGAAACACCGCTTAGTGAGCAGGCTATGTGGCAAGCTC
TGGAATTGGCCCAGTCTAAGAACTTTATCGAAGACAAGGAAGCTGGCTTAGCGTCAGAAGTGGCCCAAGGAGGAACCAAC
TTCTCAGGTGGTCAAAGACAGCGTCTGGCAATTGCGCGTGCCTTGGCTCGAAAACCAGAAATCCTCATCTTTGATGACTC
CTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTACGCCAAGAGTTAGCAGAGAAAACTAAGTCTATGACCAAGCTCA
TTGTCGCACAGCGTATTTCAACGATTATGGATGCAGATTTGATTTTGGTCTTGGATCAAGGGAAAGTCGTGGGACAAGGC
ACCCATAAGGAACTTCTAGCTAATAATGAAGTTTACCAAGAAATTGCCTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A387B170

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.889

100

0.683


Multiple sequence alignment