Detailed information NTG0317150

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: D7D50_RS07710
• Genome accession: NZ_CP032620
• Coordinates: 1541884..1543116 (+)
• Length: 410 a.a.
• NCBI ID: WP_120701912.1
• Uniprot ID: -
• Organism: Streptococcus koreensis strain KCOM 2890 (=JS71)
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1536884..1548116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D50_RS07700 (D7D50_07700)	-	1541161..1541673 (+)	513	WP_120701910.1	dihydrofolate reductase	-
D7D50_RS07710 (D7D50_07710)	clpX	1541884..1543116 (+)	1233	WP_120701912.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
D7D50_RS07715 (D7D50_07715)	yihA	1543128..1543724 (+)	597	WP_120701913.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
D7D50_RS07720 (D7D50_07720)	-	1543871..1544569 (+)	699	WP_120701914.1	glucosaminidase domain-containing protein	-
D7D50_RS07725 (D7D50_07725)	-	1544760..1545557 (+)	798	WP_120701915.1	formate/nitrite transporter family protein	-
D7D50_RS07735 (D7D50_07735)	rplJ	1545795..1546295 (+)	501	WP_006596316.1	50S ribosomal protein L10	-
D7D50_RS07740 (D7D50_07740)	rplL	1546372..1546740 (+)	369	WP_001196965.1	50S ribosomal protein L7/L12	-
D7D50_RS07745 (D7D50_07745)	-	1547227..1547679 (+)	453	WP_023023308.1	hypothetical protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45598.12 Da
• Isoelectric Point: 4.3996

>NTDB_id=317150 D7D50_RS07710 WP_120701912.1 1541884..1543116(+) (clpX) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MPTNQSNDMMVYCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLSDLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHENREEDNDVDLQKSNILMVGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDESSSYMQEIIAEDIQKFGIIPELIGRLPVLAALEQLTVEDLVR
ILKEPRNALVKQYQALLSFDDVELEFDNEALEEIASKAIERKTGARGLRSIIEETMMDVMFEVPSQEDVKLVRITKEAVK
GTEKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=317150 D7D50_RS07710 WP_120701912.1 1541884..1543116(+) (clpX) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGCCTACAAATCAATCAAACGATATGATGGTTTATTGTTCCTTCTGCGGGAAAAACCAAGACGAAGTACAGAAGATTAT
CGCTGGGAACAATGCCTTTATCTGTAATGAATGTGTTGAGTTAGCTCAAGAAATCATTCGAGAAGAACTTGCTGAGGAAG
TCTTGTCAGACCTTTCAGAAGTTCCAAAACCAATCGAACTCCTCAATATCCTCAACCATTATGTCATCGGTCAGGATCGT
GCCAAACGAGCGCTAGCAGTAGCAGTCTACAATCACTACAAACGGATTAATTTCCACGAAAATCGTGAAGAAGACAACGA
TGTAGATCTACAAAAATCAAACATTTTGATGGTCGGTCCTACAGGTTCAGGAAAAACTTTCTTGGCTCAAACGCTTGCTA
AGAGCTTAAATGTTCCATTTGCTATCGCCGATGCGACAGCCTTGACAGAAGCTGGTTACGTCGGAGAAGACGTTGAGAAC
ATCCTTCTTAAGCTATTGCAAGCTGCTGACTTCAATATTGAACGTGCAGAGCGAGGCATCATCTATGTTGATGAAATCGA
TAAGATTGCCAAGAAGAGCGAGAATGTCTCTATCACCCGTGATGTGTCTGGTGAAGGGGTACAGCAAGCCCTCTTGAAGA
TCATCGAGGGAACTGTTGCCAGCGTGCCACCTCAAGGAGGACGCAAGCACCCACAACAAGAGATGATCCAAGTCGACACC
AAAAACATTCTTTTCATCGTTGGTGGAGCCTTTGATGGGATTGAAGAAATTGTGAAGCAACGTCTAGGTGAAAAGATTAT
CGGGTTTGGCCAAAACAACAAAGCCATTGATGAATCCAGCTCTTATATGCAAGAAATCATTGCAGAAGATATCCAAAAAT
TCGGTATTATTCCTGAGTTAATTGGTCGTCTTCCAGTTCTTGCTGCTTTGGAACAACTGACAGTTGAAGATCTTGTCCGT
ATTTTGAAAGAACCAAGAAATGCCTTGGTAAAACAATACCAAGCTCTCTTATCCTTTGATGATGTTGAATTAGAATTTGA
TAACGAAGCCCTTGAAGAAATTGCAAGTAAGGCTATTGAACGCAAGACAGGTGCTCGTGGATTACGCTCTATCATCGAAG
AAACTATGATGGATGTCATGTTTGAAGTTCCAAGTCAAGAAGATGTCAAACTGGTTCGAATCACCAAAGAAGCGGTTAAG
GGAACTGAAAAGCCAATTTTAGAAACTGCCTAG

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	86.585	100	0.866
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.458	98.049	0.573