Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   D7D50_RS06205 Genome accession   NZ_CP032620
Coordinates   1230449..1231258 (+) Length   269 a.a.
NCBI ID   WP_048689535.1    Uniprot ID   A0A3R9MG28
Organism   Streptococcus koreensis strain KCOM 2890 (=JS71)     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1225449..1236258
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D50_RS06185 (D7D50_06185) thrS 1226085..1228028 (+) 1944 WP_120701747.1 threonine--tRNA ligase -
  D7D50_RS06195 (D7D50_06195) micA 1228400..1229101 (+) 702 WP_117744500.1 response regulator YycF Regulator
  D7D50_RS06200 (D7D50_06200) micB 1229094..1230440 (+) 1347 WP_117744499.1 cell wall metabolism sensor histidine kinase VicK Regulator
  D7D50_RS06205 (D7D50_06205) vicX 1230449..1231258 (+) 810 WP_048689535.1 MBL fold metallo-hydrolase Regulator
  D7D50_RS06210 (D7D50_06210) - 1231342..1231704 (+) 363 WP_023023915.1 YbaN family protein -
  D7D50_RS06215 (D7D50_06215) rnc 1231863..1232564 (+) 702 WP_117744497.1 ribonuclease III -
  D7D50_RS06220 (D7D50_06220) smc 1232555..1236100 (+) 3546 WP_120701748.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29716.67 Da        Isoelectric Point: 5.7538

>NTDB_id=317146 D7D50_RS06205 WP_048689535.1 1230449..1231258(+) (vicX) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MDEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEATWKAMEGSKYLGKVDDSQKHLFEMGKTLTFGDLDVESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNKTKKIYLGHLSKENNIKELAHMTMVN
QLARADLAVGHDFDVLDTSPDTATPLVDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=317146 D7D50_RS06205 WP_048689535.1 1230449..1231258(+) (vicX) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGGATGAAAAAGGGTTTAAATATAGTATTTTAGCTTCAGGATCGAGTGGTAATTCGTTTTACTTAGAGACTCCTAAGAA
GAAAATTCTAGTAGATGCAGGCTTGTCCGGGAAGAAAATTACAGGTTTGCTTGCAGAGATTGATCGCAAACCCGAAGATC
TTGATGCTATTTTGATCACACATGAACATTCAGATCACATTCATGGCGTTGGTGTGTTAGCTCGTAAATACGGGATGGAC
CTATACGCCAATGAAGCTACCTGGAAGGCCATGGAGGGAAGCAAGTACCTTGGGAAGGTCGACGACTCCCAGAAACATCT
TTTTGAAATGGGTAAGACCTTAACCTTCGGGGATTTGGATGTGGAAAGTTTTGGTGTTAGCCATGATGCTGCAGCTCCCC
AGTTCTATCGTTTCATGAAGGATGGGAAGAGCTTTGTCATGCTGACGGATACAGGTTATGTCAGTGATCGAATGGCAGGG
ATTGTTGAAAATGCAGATGGCTATTTGATCGAGTCCAACCACGATGTGGAAATCCTACGGGCAGGCTCTTATGCTTGGCG
ATTAAAGCAACGGATCTTATCCGATTTGGGCCACCTCTCTAATGAAGATGGCGCAGATGCTATGATTCGGACCCTAGGCA
ATAAGACCAAAAAGATTTATCTGGGCCACTTATCCAAGGAAAACAATATCAAGGAATTGGCCCATATGACCATGGTTAAT
CAACTGGCTCGAGCAGATCTAGCAGTGGGGCACGATTTTGACGTCTTGGATACATCTCCAGATACAGCGACTCCATTAGT
AGATATCTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3R9MG28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment