Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | PA34_RS26780 | Genome accession | NZ_CP032552 |
| Coordinates | 5557402..5557926 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116261.1 | Uniprot ID | Q7WZP2 |
| Organism | Pseudomonas aeruginosa strain PA34 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5552402..5562926
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA34_RS26760 (PA34_026760) | pilR | 5553664..5555001 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| PA34_RS26765 (PA34_026765) | thiO | 5555047..5556141 (-) | 1095 | WP_003141551.1 | glycine oxidase ThiO | - |
| PA34_RS26770 (PA34_026770) | - | 5556281..5556781 (+) | 501 | WP_016562346.1 | GspH/FimT family pseudopilin | - |
| PA34_RS26775 (PA34_026775) | - | 5556904..5557392 (+) | 489 | WP_003141552.1 | GspH/FimT family pseudopilin | - |
| PA34_RS26780 (PA34_026780) | pilV | 5557402..5557926 (+) | 525 | WP_003116261.1 | type IV pilus modification protein PilV | Machinery gene |
| PA34_RS26785 (PA34_026785) | - | 5557935..5558750 (+) | 816 | WP_016254061.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| PA34_RS26790 (PA34_026790) | - | 5558747..5559352 (+) | 606 | WP_003116263.1 | pilus assembly protein | - |
| PA34_RS26795 (PA34_026795) | - | 5559366..5562842 (+) | 3477 | WP_023100239.1 | PilC/PilY family type IV pilus protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18763.51 Da Isoelectric Point: 4.9113
>NTDB_id=316924 PA34_RS26780 WP_003116261.1 5557402..5557926(+) (pilV) [Pseudomonas aeruginosa strain PA34]
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
Nucleotide
Download Length: 525 bp
>NTDB_id=316924 PA34_RS26780 WP_003116261.1 5557402..5557926(+) (pilV) [Pseudomonas aeruginosa strain PA34]
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
59.429 |
100 |
0.598 |