Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   D6022_RS20270 Genome accession   NZ_CP032538
Coordinates   3814596..3815549 (-) Length   317 a.a.
NCBI ID   WP_009328848.1    Uniprot ID   A0A415IZV0
Organism   Bacillus licheniformis strain MT-B06     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3809596..3820549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D6022_RS20240 - 3809699..3810673 (-) 975 WP_009328843.1 ABC transporter ATP-binding protein -
  D6022_RS20245 - 3810865..3811653 (-) 789 WP_009328844.1 DUF2268 domain-containing protein -
  D6022_RS20250 fabF 3811741..3812979 (-) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  D6022_RS20255 - 3813001..3813939 (-) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  D6022_RS20260 - 3814109..3814348 (+) 240 WP_009328847.1 hypothetical protein -
  D6022_RS20265 comZ 3814400..3814570 (-) 171 WP_031314537.1 ComZ family protein Regulator
  D6022_RS20270 med 3814596..3815549 (-) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  D6022_RS20275 - 3815636..3816211 (-) 576 WP_016885912.1 hypothetical protein -
  D6022_RS20280 - 3816298..3817032 (-) 735 WP_017474223.1 hypothetical protein -
  D6022_RS20285 - 3817264..3817458 (+) 195 WP_009328851.1 YjzD family protein -
  D6022_RS20290 - 3817529..3817708 (-) 180 WP_003180573.1 YjzC family protein -
  D6022_RS20295 - 3817890..3818702 (+) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  D6022_RS20300 argF 3818736..3819686 (-) 951 WP_003180569.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35401.24 Da        Isoelectric Point: 4.7908

>NTDB_id=316867 D6022_RS20270 WP_009328848.1 3814596..3815549(-) (med) [Bacillus licheniformis strain MT-B06]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKAEHQNVISISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFAEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQEGVIEMGKFSPVVDPSFQEEMKRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=316867 D6022_RS20270 WP_009328848.1 3814596..3815549(-) (med) [Bacillus licheniformis strain MT-B06]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAGTGATCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGATGTCTATTATAAAGAAGGAATCGATAATGACGCGGCTATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAATCTGATCTATGGGCACGGAAGCGAATACGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCCGATATTCATTTTGTTTTAATGAACTCTAAAGCCGAACACCAAAATGTGATAAGCATATCGCTTGAGGGAGAAGCGA
TGGGGTTTTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTGGAAGGGTTTGCCGAAGGGGCAAAATACCTCGATCCGGACATTGAGGTAATGACAGAATACGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAAGACGGGCTGTACGCGATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGGTCCTTTGACATTCAAGAAGGCGTCATCGAGATGGGGAAATTCAGCCCTGTTGTCGATC
CGTCATTTCAAGAAGAGATGAAACGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A415IZV0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

67.197

99.054

0.666

Multiple sequence alignment