Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   D6022_RS20265 Genome accession   NZ_CP032538
Coordinates   3814400..3814570 (-) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MT-B06     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3809400..3819570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D6022_RS20240 - 3809699..3810673 (-) 975 WP_009328843.1 ABC transporter ATP-binding protein -
  D6022_RS20245 - 3810865..3811653 (-) 789 WP_009328844.1 DUF2268 domain-containing protein -
  D6022_RS20250 fabF 3811741..3812979 (-) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  D6022_RS20255 - 3813001..3813939 (-) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  D6022_RS20260 - 3814109..3814348 (+) 240 WP_009328847.1 hypothetical protein -
  D6022_RS20265 comZ 3814400..3814570 (-) 171 WP_031314537.1 ComZ family protein Regulator
  D6022_RS20270 med 3814596..3815549 (-) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  D6022_RS20275 - 3815636..3816211 (-) 576 WP_016885912.1 hypothetical protein -
  D6022_RS20280 - 3816298..3817032 (-) 735 WP_017474223.1 hypothetical protein -
  D6022_RS20285 - 3817264..3817458 (+) 195 WP_009328851.1 YjzD family protein -
  D6022_RS20290 - 3817529..3817708 (-) 180 WP_003180573.1 YjzC family protein -
  D6022_RS20295 - 3817890..3818702 (+) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=316866 D6022_RS20265 WP_031314537.1 3814400..3814570(-) (comZ) [Bacillus licheniformis strain MT-B06]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=316866 D6022_RS20265 WP_031314537.1 3814400..3814570(-) (comZ) [Bacillus licheniformis strain MT-B06]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment