Detailed information NTG0316788

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: E5N77_RS12740
• Genome accession: NZ_CP039123
• Coordinates: 2821243..2822529 (-)
• Length: 428 a.a.
• NCBI ID: WP_019325395.1
• Uniprot ID: A0ABW1Y045
• Organism: Streptomyces sp. SS52
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2816243..2827529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5N77_RS12730 (E5N77_12730)	-	2817432..2820056 (-)	2625	WP_030972618.1	valine--tRNA ligase	-
E5N77_RS12735 (E5N77_12735)	-	2820195..2821178 (+)	984	WP_136235571.1	hypothetical protein	-
E5N77_RS12740 (E5N77_12740)	clpX	2821243..2822529 (-)	1287	WP_019325395.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
E5N77_RS12745 (E5N77_12745)	clpP	2822721..2823401 (-)	681	WP_019325396.1	ATP-dependent Clp protease proteolytic subunit	Regulator
E5N77_RS12750 (E5N77_12750)	clpP	2823485..2824090 (-)	606	WP_029393242.1	ATP-dependent Clp protease proteolytic subunit	Regulator
E5N77_RS12755 (E5N77_12755)	tig	2824376..2825782 (-)	1407	WP_019325398.1	trigger factor	-
E5N77_RS12770 (E5N77_12770)	-	2826394..2826588 (-)	195	WP_029393243.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46798.56 Da
• Isoelectric Point: 4.7360

>NTDB_id=316788 E5N77_RS12740 WP_019325395.1 2821243..2822529(-) (clpX) [Streptomyces sp. SS52]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=316788 E5N77_RS12740 WP_019325395.1 2821243..2822529(-) (clpX) [Streptomyces sp. SS52]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTGGCGGAGACCA
GCGAGGTGCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAATGGCGGCGCCCAAGGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCCCGCATGCTGAACGTGCCCTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCTGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCCTCCATCACGCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACCACGGCCTCGGTCCCGCCCCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATTACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACGAGCGGCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCCGACGTGGTCCTCTCCAACGTCAACCCGACGCTCATCCCGCGTGACTCGCGGGGACGCGGCTCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.531	94.159	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523