Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   OEA_RS04205 Genome accession   NZ_CP032527
Coordinates   809011..810738 (+) Length   575 a.a.
NCBI ID   WP_016765540.1    Uniprot ID   -
Organism   Priestia megaterium NCT-2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 804011..815738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OEA_RS04180 (OEA_05595) - 804208..804441 (+) 234 WP_013059140.1 exodeoxyribonuclease VII small subunit -
  OEA_RS04185 (OEA_05600) - 804441..805337 (+) 897 WP_013059139.1 polyprenyl synthetase family protein -
  OEA_RS04190 (OEA_05605) dxs 805658..807559 (+) 1902 WP_016765541.1 1-deoxy-D-xylulose-5-phosphate synthase -
  OEA_RS04195 (OEA_05610) - 807556..808383 (+) 828 WP_013084988.1 TlyA family RNA methyltransferase -
  OEA_RS04200 (OEA_05615) ahrC 808545..808994 (+) 450 WP_013059136.1 transcriptional regulator AhrC/ArgR -
  OEA_RS04205 (OEA_05620) recN 809011..810738 (+) 1728 WP_016765540.1 DNA repair protein RecN Machinery gene
  OEA_RS04210 (OEA_05625) spoIVB 810921..812201 (+) 1281 WP_016765539.1 SpoIVB peptidase -
  OEA_RS04215 (OEA_05630) spo0A 812429..813217 (+) 789 WP_013084985.1 sporulation transcription factor Spo0A -
  OEA_RS04220 (OEA_05635) - 813608..814939 (-) 1332 WP_013084983.1 peptide MFS transporter -
  OEA_RS04225 (OEA_05640) - 815252..815404 (-) 153 WP_016765538.1 YycC family protein -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 64693.23 Da        Isoelectric Point: 4.8014

>NTDB_id=316765 OEA_RS04205 WP_016765540.1 809011..810738(+) (recN) [Priestia megaterium NCT-2]
MLAELSIKNFAIIDELSVSFEKGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRHGTDRAEIEGLFLFDEEQHPSHEK
AKQVGLEVEDGMIVLRRDITTNGKSICRINGKLVTLAILREVGQTLIDIHGQHEHQDLMNQDRHLTLLDQYGGEKVEEAL
TEYREVFSRYTSLKKQLDQLTENEQQMAHRLDLIQFQLDEIKAANLQLNEDEELNEERLKISNFEKIYTSLNDAYNALHG
EHQGLDWVGVAMNHTEDISSLEKNYAEISEIISSSFYQLEDASYKIRQQLDLLEFDPKRLDFIEARLNEINHLKRKYGQS
VDEILEYAAQIEDEIDRIENRDTHVSKIKEELNSVAQDLLVEANNVSAIRKKLAQELTDSIHHELQELYMAKTVFQIKFS
VVNAGKNDVEVNGERIKFTKDGIDNVEFYISTNPGEPLKPLAKVASGGELSRIMLALKSIFSKHQGVTSIIFDEVDTGVS
GRVAQSIGEKIHAISVDSQVLCISHLPQVAAMADTHLFIAKEIKGDRTTTSVLPLTLDEKVKEIGRMIAGAEITSLTKEH
AKELLDLADKMKHTI

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=316765 OEA_RS04205 WP_016765540.1 809011..810738(+) (recN) [Priestia megaterium NCT-2]
TTGTTAGCTGAATTATCCATTAAAAACTTTGCGATTATTGATGAACTTTCTGTTTCATTTGAAAAAGGCTTAACGGTATT
AACAGGCGAAACAGGAGCGGGGAAATCGATTATTATTGATGCCATTTCATTGTTAGTAGGTGGAAGAGGCTCTTCGGAGT
TTGTACGCCACGGAACAGACAGAGCCGAAATTGAAGGACTTTTCTTATTTGATGAAGAACAGCATCCGAGTCATGAAAAA
GCCAAACAAGTCGGTTTGGAAGTGGAAGATGGAATGATTGTGCTTCGCCGAGATATCACTACAAATGGGAAAAGTATTTG
CCGCATCAACGGTAAGCTCGTAACGTTAGCTATCCTACGTGAAGTTGGACAGACGTTAATTGATATACATGGACAGCATG
AGCACCAAGATTTAATGAATCAAGATCGTCACTTAACTCTTCTTGATCAATATGGAGGAGAAAAAGTAGAAGAGGCTTTG
ACGGAGTATCGAGAGGTATTTTCTAGGTATACATCGCTAAAAAAGCAGCTCGATCAATTAACTGAAAATGAACAGCAGAT
GGCACATCGCCTCGATCTTATTCAATTTCAATTAGATGAAATCAAAGCGGCAAATTTGCAGCTGAACGAAGACGAGGAAC
TAAATGAAGAGCGTTTGAAGATTTCTAACTTTGAAAAGATCTATACGTCGCTAAACGATGCGTACAATGCGCTGCACGGT
GAACACCAAGGTTTAGATTGGGTCGGTGTAGCAATGAATCATACGGAGGATATTTCGTCACTGGAAAAAAACTATGCCGA
AATTTCTGAGATCATTTCATCGAGCTTCTATCAGCTAGAAGACGCATCTTATAAAATTCGTCAGCAGCTTGATTTATTAG
AATTTGATCCCAAACGCTTAGACTTTATTGAAGCACGTTTAAATGAAATTAATCACTTAAAGCGTAAATACGGTCAAAGT
GTAGATGAAATTTTAGAATATGCAGCACAAATTGAAGATGAAATTGATCGTATTGAAAATCGAGATACGCATGTGAGCAA
GATCAAAGAAGAGTTAAACAGTGTAGCACAGGATTTATTAGTAGAAGCTAATAACGTTTCAGCTATTCGAAAAAAACTTG
CTCAGGAGTTAACGGACAGCATCCATCATGAGCTTCAAGAACTGTATATGGCTAAGACTGTATTTCAAATTAAATTCTCT
GTTGTAAATGCAGGCAAAAATGACGTTGAAGTAAATGGAGAAAGAATAAAATTCACCAAAGACGGCATTGACAACGTAGA
ATTTTATATTTCTACCAATCCTGGTGAACCTTTAAAGCCTCTGGCAAAAGTAGCATCAGGAGGAGAACTGTCAAGAATTA
TGCTGGCGTTAAAAAGCATCTTCTCTAAGCATCAAGGCGTGACGTCCATTATCTTTGACGAAGTTGATACAGGCGTAAGT
GGAAGAGTAGCTCAATCGATCGGTGAAAAAATACATGCTATTTCTGTTGATTCACAAGTTCTCTGTATATCTCATCTGCC
TCAGGTAGCAGCGATGGCAGATACTCATCTCTTTATTGCTAAAGAGATAAAAGGTGATCGTACAACGACGTCTGTTCTTC
CATTAACTCTTGATGAAAAAGTAAAAGAAATTGGTCGGATGATTGCAGGAGCTGAAATTACAAGCTTAACGAAGGAACAT
GCCAAAGAGCTTTTAGATTTAGCGGATAAGATGAAGCACACCATTTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

65.104

100

0.652

Multiple sequence alignment