Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   D6869_RS09805 Genome accession   NZ_CP032526
Coordinates   1960207..1960908 (-) Length   233 a.a.
NCBI ID   WP_011676802.1    Uniprot ID   A0A0M2ZUZ8
Organism   Lactococcus cremoris strain 4B0     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1955207..1965908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D6869_RS09790 (D6869_09915) sufC 1956431..1957201 (-) 771 WP_011835712.1 Fe-S cluster assembly ATPase SufC -
  D6869_RS09795 (D6869_09925) - 1957422..1958806 (+) 1385 WP_164845598.1 IS3 family transposase -
  D6869_RS09800 (D6869_09930) - 1958879..1960204 (-) 1326 WP_011835713.1 MraY family glycosyltransferase -
  D6869_RS09805 (D6869_09935) mecA 1960207..1960908 (-) 702 WP_011676802.1 adaptor protein MecA Regulator
  D6869_RS09810 (D6869_09940) - 1961038..1961772 (-) 735 WP_011835714.1 amino acid ABC transporter ATP-binding protein -
  D6869_RS09815 (D6869_09945) - 1961772..1962458 (-) 687 WP_011835715.1 amino acid ABC transporter permease -
  D6869_RS09820 (D6869_09950) - 1962605..1963513 (-) 909 WP_011835716.1 diacylglycerol kinase family protein -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27046.46 Da        Isoelectric Point: 4.1802

>NTDB_id=316722 D6869_RS09805 WP_011676802.1 1960207..1960908(-) (mecA) [Lactococcus cremoris strain 4B0]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGAKKEEAEHEPDFIYYSIRYDDMMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKAKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLITTRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=316722 D6869_RS09805 WP_011676802.1 1960207..1960908(-) (mecA) [Lactococcus cremoris strain 4B0]
ATGAAGTATGAGGATATAAATGAAAACACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAGTT
ATCTGACTTTTTTGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTAGTTGATGAACTTGGCTTAGAAAATCGTT
TTGGAAATGTAGGGATGTTAACTTTCCAAATTCAACCCTTCCCACAAGGCGTCCATATGATTGTTCATGAAGAAGCAATG
TTGGGTGAAGGCGGAGAGATTCCAGATGATCCTGAAGAATTTGAAGAATTAATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGACTTGGTTTACCAGGGGCTAAAAAAGAAG
AAGCCGAACATGAGCCAGACTTTATATACTACTCTATTCGTTATGATGACATGATGTCTGTCTTGACTGGAATAAAAAAT
GTGAAATTCGCAGATGAAGAGTCAGAATTTTATCGTTATGATGGTAATTTTTATCTTGTTGTTTTAGATAATCAAAAAGC
AAAAGGTAAAATGCATGTTGAAAGCACACGTTCACGGATGATGGAATATGGTGAAGCGACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGCCTAATCACAACGCGTGCTTTAGACGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0M2ZUZ8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

100

100

1

  mecA Lactococcus lactis subsp. lactis strain DGCC12653

96.567

100

0.966


Multiple sequence alignment