Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | D6I99_RS05220 | Genome accession | NZ_CP032522 |
| Coordinates | 997363..997665 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BC | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 992363..1002665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D6I99_RS05195 | rpsR | 992725..992985 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| D6I99_RS05200 | lon | 993046..995421 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| D6I99_RS05205 | - | 995438..996085 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| D6I99_RS05210 | fliW | 996246..996635 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| D6I99_RS05215 | proC | 996635..997366 (+) | 732 | WP_136696261.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| D6I99_RS05220 | ctsT | 997363..997665 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| D6I99_RS05225 | - | 997662..998324 (+) | 663 | WP_052817074.1 | hypothetical protein | - |
| D6I99_RS05230 | - | 998321..998773 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| D6I99_RS05235 | hemD | 998770..999399 (-) | 630 | WP_057031438.1 | uroporphyrinogen-III synthase | - |
| D6I99_RS05240 | thiE | 999377..1000009 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| D6I99_RS05245 | thiD | 999999..1000811 (-) | 813 | WP_052817203.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| D6I99_RS05250 | - | 1000808..1001494 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| D6I99_RS05255 | - | 1001491..1002252 (-) | 762 | WP_136696262.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=316661 D6I99_RS05220 WP_002853046.1 997363..997665(+) (ctsT) [Campylobacter jejuni strain BC]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=316661 D6I99_RS05220 WP_002853046.1 997363..997665(+) (ctsT) [Campylobacter jejuni strain BC]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |