Detailed information NTG0316233

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D4K70_RS05880
• Genome accession: NZ_CP032476
• Coordinates: 1184469..1185269 (-)
• Length: 266 a.a.
• NCBI ID: WP_139532495.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 381-C-EK1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1179469..1190269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K70_RS05830	-	1179771..1180106 (-)	336	WP_001862999.1	hypothetical protein	-
D4K70_RS05835	-	1180096..1180881 (-)	786	WP_139532488.1	hypothetical protein	-
D4K70_RS05840	-	1180881..1181262 (-)	382	Protein_1117	DUF1294 domain-containing protein	-
D4K70_RS05850	-	1181559..1181825 (-)	267	WP_001883605.1	hypothetical protein	-
D4K70_RS05855	-	1181813..1182187 (-)	375	WP_001882828.1	lysozyme	-
D4K70_RS05860	-	1182244..1182804 (-)	561	WP_139532490.1	hypothetical protein	-
D4K70_RS05865	-	1182788..1183126 (-)	339	WP_139532492.1	hypothetical protein	-
D4K70_RS05870	-	1183253..1183834 (-)	582	WP_120906710.1	tetratricopeptide repeat protein	-
D4K70_RS05875	dprB	1184068..1184472 (-)	405	WP_139532493.1	Holliday junction resolvase RuvX	Machinery gene
D4K70_RS05880	dprA	1184469..1185269 (-)	801	WP_139532495.1	DNA-processing protein DprA	Machinery gene
D4K70_RS05885	minE	1185276..1185509 (-)	234	WP_139532497.1	cell division topological specificity factor MinE	-
D4K70_RS05890	minD	1185506..1186312 (-)	807	WP_139532499.1	septum site-determining protein MinD	-
D4K70_RS05895	ilvC	1186336..1187328 (-)	993	WP_139532501.1	ketol-acid reductoisomerase	-
D4K70_RS05905	-	1187577..1188359 (+)	783	WP_139532502.1	NAD+ synthase	-
D4K70_RS05910	-	1188356..1189294 (+)	939	WP_139532504.1	tetraacyldisaccharide 4'-kinase	-
D4K70_RS05915	pseH	1189227..1189769 (-)	543	WP_139532506.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29787.69 Da
• Isoelectric Point: 8.5819

>NTDB_id=316233 D4K70_RS05880 WP_139532495.1 1184469..1185269(-) (dprA) [Helicobacter pylori strain 381-C-EK1]
MKSNFQYSTLENIPKAFGILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=316233 D4K70_RS05880 WP_139532495.1 1184469..1185269(-) (dprA) [Helicobacter pylori strain 381-C-EK1]
ATGAAAAGTAATTTCCAATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGGCATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATTATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414