Detailed information NTG0316134

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D4L66_RS05730
• Genome accession: NZ_CP032471
• Coordinates: 1182063..1182863 (-)
• Length: 266 a.a.
• NCBI ID: WP_139518692.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 479-C2-EK2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1177063..1187863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4L66_RS08285	-	1177937..1178134 (-)	198	WP_306821131.1	hypothetical protein	-
D4L66_RS05690	-	1178124..1178909 (-)	786	WP_139518687.1	hypothetical protein	-
D4L66_RS05695	-	1178909..1179290 (-)	382	Protein_1080	DUF1294 domain-containing protein	-
D4L66_RS05700	-	1179597..1179854 (-)	258	WP_180339187.1	lysozyme	-
D4L66_RS08185	-	1179857..1180085 (-)	229	Protein_1082	lysozyme	-
D4L66_RS05710	-	1180115..1180681 (-)	567	WP_139518690.1	hypothetical protein	-
D4L66_RS05715	-	1180665..1180970 (-)	306	WP_000699933.1	hypothetical protein	-
D4L66_RS05720	-	1181096..1181554 (-)	459	WP_139518691.1	tetratricopeptide repeat protein	-
D4L66_RS05725	dprB	1181662..1182066 (-)	405	WP_000599172.1	Holliday junction resolvase RuvX	Machinery gene
D4L66_RS05730	dprA	1182063..1182863 (-)	801	WP_139518692.1	DNA-processing protein DprA	Machinery gene
D4L66_RS05735	minE	1182870..1183103 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
D4L66_RS05740	minD	1183100..1183906 (-)	807	WP_139518693.1	septum site-determining protein MinD	-
D4L66_RS05745	ilvC	1183930..1184922 (-)	993	WP_139523725.1	ketol-acid reductoisomerase	-
D4L66_RS05755	-	1185180..1185962 (+)	783	WP_139518696.1	NAD+ synthase	-
D4L66_RS05760	-	1185959..1186897 (+)	939	WP_139518697.1	tetraacyldisaccharide 4'-kinase	-
D4L66_RS05765	pseH	1186830..1187372 (-)	543	WP_139518699.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29903.88 Da
• Isoelectric Point: 8.7885

>NTDB_id=316134 D4L66_RS05730 WP_139518692.1 1182063..1182863(-) (dprA) [Helicobacter pylori strain 479-C2-EK2]
MKSHFQYSALENIPKVFDTLKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=316134 D4L66_RS05730 WP_139518692.1 1182063..1182863(-) (dprA) [Helicobacter pylori strain 479-C2-EK2]
ATGAAAAGCCATTTCCAATACAGTGCACTAGAGAATATCCCTAAAGTCTTTGATACGCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATTTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCTGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAGCCCTTATTTGTTTTACCTCAGCGCTTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41