Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   D5289_RS04915 Genome accession   NZ_CP032460
Coordinates   1024183..1025460 (-) Length   425 a.a.
NCBI ID   WP_054396554.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain ATG-K2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1019183..1030460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D5289_RS04910 (D5289_04920) - 1022434..1024143 (-) 1710 WP_054396556.1 proline--tRNA ligase -
  D5289_RS04915 (D5289_04925) eeP 1024183..1025460 (-) 1278 WP_054396554.1 RIP metalloprotease RseP Regulator
  D5289_RS04920 (D5289_04930) - 1025498..1026283 (-) 786 WP_054396552.1 phosphatidate cytidylyltransferase -
  D5289_RS04925 (D5289_04935) - 1026299..1027078 (-) 780 WP_054396550.1 isoprenyl transferase -
  D5289_RS04930 (D5289_04940) frr 1027198..1027761 (-) 564 WP_054396548.1 ribosome recycling factor -
  D5289_RS04935 (D5289_04945) pyrH 1027763..1028485 (-) 723 WP_003640737.1 UMP kinase -
  D5289_RS04940 (D5289_04950) tsf 1028685..1029563 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45863.38 Da        Isoelectric Point: 9.8245

>NTDB_id=316047 D5289_RS04915 WP_054396554.1 1024183..1025460(-) (eeP) [Lactiplantibacillus plantarum strain ATG-K2]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQVGSDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKRYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLNLTIKRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=316047 D5289_RS04915 WP_054396554.1 1024183..1025460(-) (eeP) [Lactiplantibacillus plantarum strain ATG-K2]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTCTATTTTGC
CAAAAAGGCTGGGATCCTAGTGCGTGAATTTTCTGTCGGGATGGGACCCAAGGCGGTCGCGTTTCGTCGTAATGCCACGA
CTTATACGTTGCGGTTTCTGCCAATCGGTGGTTACGTGCGCATGGCCGGCGTGGCTGACGATGAGGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTACAAGTTGGTTCAGATGGAATTGTTCATTCAATCAATGCTAGTAAGAAGACGACGTTGTT
CAATGGTATTCCACTGTCAGTGACGGCGACTGACCTCGAAAAAGAACTCTGGATCGAGGGTTACGAGAACGGAGACGAGA
GTGAAGTCAAACGATACGCCGTTGACCATGACGCGACGATCGTCGAAAGTGATGGTACCGAGGTTCAAATTGCGCCGGTC
GACGTCCAATTTCAATCGGCCAAGCTATGGCAACGCATGCTGACCAATTTTGCCGGCCCGATGAATAACTTCATCTTGGC
CATCATTACGTTTGCAATTCTGGCCTTTATGCAGGGTGGCGTTACGAGTACAACGACGCACGTTGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGCATCCAAAAAGGTGATCAAATCGTGGCGGTTAACGGTAAAAAGATGACGAGTGCTCAG
TCGATTTCGCTGTTGATTCAAGATAGTCCGAAACAACGGTTGAATCTGACCATCAAAAGAGCTGGTCAGACTAAAAAAAT
CGCGGTGACCCCCGCTGCTAAGACGGTCTCTGGTAACCGAATCGGTCAAATCGGGGTCCAATGGGCGACCAAGACCGACA
CGAGCCTGGGAGCCAAGTTAGCATACGGCTTTACTGGTTCATGGGGAATCACCAAGCAGATTTTTCAAGTGCTCGGTCGG
ATGGTCACGCACGGTTTTAGTTTGAACGATTTAGGCGGGCCGGTGGCGATTTTTGCGACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGTACGGTGATCTATTTACTCGCTGTATTGTCGATCAACCTTGGAATTGTTAATTTATTACCAATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTTCGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(210-260)

Peptidase family M50 (Peptidase_M50)

(7-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494

Multiple sequence alignment