Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LLW34_RS11915 Genome accession   NZ_CP032430
Coordinates   2282502..2283788 (-) Length   428 a.a.
NCBI ID   WP_205288152.1    Uniprot ID   -
Organism   Lactococcus cremoris strain W34     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2277502..2288788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLW34_RS13365 - 2278010..2278603 (-) 594 Protein_2316 PolC-type DNA polymerase III N-terminal domain-containing protein -
  LLW34_RS11900 (LLW34_03475) - 2278777..2278968 (-) 192 WP_021211222.1 hypothetical protein -
  LLW34_RS11905 (LLW34_2325) - 2279235..2280566 (-) 1332 WP_021211223.1 FAD/NAD(P)-binding oxidoreductase -
  LLW34_RS11910 (LLW34_2326) - 2280582..2282432 (-) 1851 WP_021211224.1 proline--tRNA ligase -
  LLW34_RS11915 (LLW34_2327) eeP 2282502..2283788 (-) 1287 WP_205288152.1 RIP metalloprotease RseP Regulator
  LLW34_RS11920 (LLW34_2328) - 2283807..2284610 (-) 804 WP_205288153.1 phosphatidate cytidylyltransferase -
  LLW34_RS11925 (LLW34_2329) - 2284610..2285344 (-) 735 WP_205288154.1 isoprenyl transferase -
  LLW34_RS11930 (LLW34_2330) yajC 2285694..2286026 (-) 333 WP_011677192.1 preprotein translocase subunit YajC -
  LLW34_RS11935 (LLW34_2331) - 2286121..2286813 (-) 693 Protein_2324 DNA alkylation repair protein -
  LLW34_RS11940 (LLW34_2332) rlmH 2286838..2287317 (-) 480 WP_011677194.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46459.04 Da        Isoelectric Point: 6.5140

>NTDB_id=315839 LLW34_RS11915 WP_205288152.1 2282502..2283788(-) (eeP) [Lactococcus cremoris strain W34]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEMK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=315839 LLW34_RS11915 WP_205288152.1 2282502..2283788(-) (eeP) [Lactococcus cremoris strain W34]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATGAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains


Predicted by InterproScan.

(217-279)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.684

100

0.561

  eeP Streptococcus thermophilus LMD-9

55.452

100

0.558


Multiple sequence alignment