Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   D4A37_RS06040 Genome accession   NZ_CP032365
Coordinates   1162936..1163112 (+) Length   58 a.a.
NCBI ID   WP_001003337.1    Uniprot ID   A0A2A8PRE8
Organism   Bacillus wiedmannii strain SR52     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1157936..1168112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D4A37_RS06020 clpC 1158270..1160870 (+) 2601 WP_000365386.1 ATP-dependent chaperone ClpB Regulator
  D4A37_RS06025 - 1160907..1161089 (-) 183 WP_001211110.1 YjzD family protein -
  D4A37_RS06030 - 1161246..1161980 (+) 735 WP_000028707.1 hydrolase -
  D4A37_RS06035 - 1162010..1162882 (+) 873 WP_141545409.1 NAD(P)-dependent oxidoreductase -
  D4A37_RS06040 comZ 1162936..1163112 (+) 177 WP_001003337.1 ComZ family protein Regulator
  D4A37_RS06045 fabH 1163344..1164276 (+) 933 WP_097918337.1 beta-ketoacyl-ACP synthase III -
  D4A37_RS06050 fabF 1164308..1165546 (+) 1239 WP_000412646.1 beta-ketoacyl-ACP synthase II -
  D4A37_RS06055 - 1165653..1166441 (+) 789 WP_046957009.1 DUF2268 domain-containing putative Zn-dependent protease -
  D4A37_RS06060 - 1166585..1167331 (+) 747 WP_000966116.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6548.72 Da        Isoelectric Point: 4.6653

>NTDB_id=315187 D4A37_RS06040 WP_001003337.1 1162936..1163112(+) (comZ) [Bacillus wiedmannii strain SR52]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=315187 D4A37_RS06040 WP_001003337.1 1162936..1163112(+) (comZ) [Bacillus wiedmannii strain SR52]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATCTTAGATTCGAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A8PRE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment