Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | D4A37_RS00525 | Genome accession | NZ_CP032365 |
| Coordinates | 95047..97482 (+) | Length | 811 a.a. |
| NCBI ID | WP_000971181.1 | Uniprot ID | A0A1A9PVG3 |
| Organism | Bacillus wiedmannii strain SR52 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 90047..102482
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D4A37_RS00510 | ctsR | 92772..93233 (+) | 462 | WP_001244556.1 | transcriptional regulator CtsR | - |
| D4A37_RS00515 | - | 93407..93955 (+) | 549 | WP_000128406.1 | UvrB/UvrC motif-containing protein | - |
| D4A37_RS00520 | - | 93960..95024 (+) | 1065 | WP_000050823.1 | protein arginine kinase | - |
| D4A37_RS00525 | clpC | 95047..97482 (+) | 2436 | WP_000971181.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| D4A37_RS00530 | radA | 97579..98955 (+) | 1377 | WP_001085204.1 | DNA repair protein RadA | Machinery gene |
| D4A37_RS00535 | disA | 98959..100032 (+) | 1074 | WP_000392165.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| D4A37_RS00540 | - | 100193..101296 (+) | 1104 | WP_000919686.1 | PIN/TRAM domain-containing protein | - |
| D4A37_RS00545 | ispD | 101313..101993 (+) | 681 | WP_000288297.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90529.40 Da Isoelectric Point: 6.5693
>NTDB_id=315176 D4A37_RS00525 WP_000971181.1 95047..97482(+) (clpC) [Bacillus wiedmannii strain SR52]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVKRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHNRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVKRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=315176 D4A37_RS00525 WP_000971181.1 95047..97482(+) (clpC) [Bacillus wiedmannii strain SR52]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACACATTTTACTTGGGCTTGTACGCGAAGGGGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GGTTAAGTCCAGAGAAGGTTCAAAAAGAGGTAGAAGCGTTAATTGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTAGGCGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTCGGAAGTAATGAAGCAAGTTCAGGTCACCAAGGTGGTTCTTCAACGAATGCAAAT
ACACCAACACTGGATAGCTTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTCTAGATCCTGTTATCGGTCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAACCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATTGTAAATAATGAAGTTCCTGAAACATTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTTATGGA
TGAAATCCGTCAAGCTGGAAATATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATTGATGCATCGAACATTTTAAAACCATCTTTAGCACGCGGAGAGTTACAATGTATCGGGGCGACAACCTTAGATGAA
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTCCAACCAATTCATGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGTTACGAAGCGCATCACCGTGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGACCGCTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAGGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTAAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTGCAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAAAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACGTGGACTCGTATACCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCACAACCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCGAAAGCTGTTCGTCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTAGCAAGAGCATTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCGACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGATGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTGAATCAGTTAGTGAAGCGCTTAAAAGAGCAAGAGATTGAATTGCATTTAACAGAAGG
AGCGATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAATACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGGGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA
TAATATTGGAACAGAACACATTTTACTTGGGCTTGTACGCGAAGGGGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GGTTAAGTCCAGAGAAGGTTCAAAAAGAGGTAGAAGCGTTAATTGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTAGGCGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTCGGAAGTAATGAAGCAAGTTCAGGTCACCAAGGTGGTTCTTCAACGAATGCAAAT
ACACCAACACTGGATAGCTTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTCTAGATCCTGTTATCGGTCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAACCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATTGTAAATAATGAAGTTCCTGAAACATTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTTGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTAAAGAAAGTTATGGA
TGAAATCCGTCAAGCTGGAAATATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CAATTGATGCATCGAACATTTTAAAACCATCTTTAGCACGCGGAGAGTTACAATGTATCGGGGCGACAACCTTAGATGAA
TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTCCAACCAATTCATGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGTTACGAAGCGCATCACCGTGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGACCGCTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAGGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTAAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTGCAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAAAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTC
GTTTCTACGTGGACTCGTATACCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCACAACCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCGAAAGCTGTTCGTCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAACTAGCAAGAGCATTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCGACTTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACGGATTCTAAAGGGCGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGATGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTGAATCAGTTAGTGAAGCGCTTAAAAGAGCAAGAGATTGAATTGCATTTAACAGAAGG
AGCGATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAATACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGGGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.049 |
99.877 |
0.859 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.625 |
98.644 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
45.969 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.859 |
79.778 |
0.422 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.859 |
79.778 |
0.422 |
| clpE | Streptococcus pneumoniae Rx1 |
52.859 |
79.778 |
0.422 |
| clpE | Streptococcus pneumoniae D39 |
52.859 |
79.778 |
0.422 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.893 |
78.175 |
0.406 |