Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | D3Z18_RS02530 | Genome accession | NZ_CP032316 |
| Coordinates | 464443..465051 (+) | Length | 202 a.a. |
| NCBI ID | WP_002851464.1 | Uniprot ID | A0AB36GA54 |
| Organism | Campylobacter jejuni subsp. jejuni strain HPC5 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 459443..470051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3Z18_RS02520 (D3Z18_02520) | ctsR | 462749..463060 (+) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
| D3Z18_RS02525 (D3Z18_02525) | ctsD | 463038..464450 (+) | 1413 | WP_038401758.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| D3Z18_RS02530 (D3Z18_02530) | ctsP | 464443..465051 (+) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| D3Z18_RS02535 (D3Z18_02535) | ctsX | 465055..465642 (+) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| D3Z18_RS02540 (D3Z18_02540) | ctsE | 465632..467194 (+) | 1563 | Protein_478 | GspE/PulE family protein | - |
| D3Z18_RS02545 (D3Z18_02545) | - | 467191..468189 (+) | 999 | Protein_479 | type II secretion system F family protein | - |
| D3Z18_RS10255 (D3Z18_02550) | - | 468284..468982 (-) | 699 | Protein_480 | hypothetical protein | - |
| D3Z18_RS02555 (D3Z18_02555) | - | 468982..469656 (-) | 675 | WP_002804144.1 | LexA family transcriptional regulator | - |
| D3Z18_RS02560 (D3Z18_02560) | - | 469806..470006 (+) | 201 | WP_002804142.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23742.78 Da Isoelectric Point: 9.9955
>NTDB_id=314975 D3Z18_RS02530 WP_002851464.1 464443..465051(+) (ctsP) [Campylobacter jejuni subsp. jejuni strain HPC5]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=314975 D3Z18_RS02530 WP_002851464.1 464443..465051(+) (ctsP) [Campylobacter jejuni subsp. jejuni strain HPC5]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTTGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTTGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
99.505 |
100 |
0.995 |