Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   D3P10_RS01320 Genome accession   NZ_CP032159
Coordinates   266368..267264 (+) Length   298 a.a.
NCBI ID   WP_047211220.1    Uniprot ID   -
Organism   Staphylococcus warneri strain 22.1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 261368..272264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D3P10_RS01300 (D3P10_01300) - 261978..263441 (+) 1464 WP_058709311.1 poly-gamma-glutamate hydrolase family protein -
  D3P10_RS01305 (D3P10_01305) - 263622..263723 (+) 102 WP_015364644.1 SE2200 family small protein -
  D3P10_RS01310 (D3P10_01310) - 263806..265260 (-) 1455 WP_049414579.1 alkaline phosphatase -
  D3P10_RS12515 - 265508..265675 (+) 168 WP_155115921.1 hypothetical protein -
  D3P10_RS01315 (D3P10_01315) braR 265697..266362 (+) 666 WP_047211221.1 response regulator transcription factor Regulator
  D3P10_RS01320 (D3P10_01320) braS 266368..267264 (+) 897 WP_047211220.1 sensor histidine kinase Regulator
  D3P10_RS01325 (D3P10_01325) - 267368..268114 (+) 747 WP_049414576.1 ABC transporter ATP-binding protein -
  D3P10_RS01330 (D3P10_01330) - 268132..270126 (+) 1995 WP_240431437.1 ABC transporter permease -
  D3P10_RS01335 (D3P10_01335) - 270216..271436 (+) 1221 WP_240431438.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34357.74 Da        Isoelectric Point: 5.6517

>NTDB_id=314235 D3P10_RS01320 WP_047211220.1 266368..267264(+) (braS) [Staphylococcus warneri strain 22.1]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPQSALMLGVAIILFIMCIYWWISYLGFQKQEKLKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVANQVRQEIVQIDNYTRLALSYLKLLNEASDMTITEVNIDDL
IKPLIMKYRIHFIEQHTKIHYQSNDDSILTDAQWTSILIEQILNNALKYARGKDIWIDFDSTSQQLSIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHIAQHLNLNVEVTSDLNKGTQFTISFPTQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=314235 D3P10_RS01320 WP_047211220.1 266368..267264(+) (braS) [Staphylococcus warneri strain 22.1]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACGTTTATATCCTTACTGTTTGTACTCATTTT
CTTTGTGTTTTCACTCCCCCAAAGTGCGCTAATGCTTGGTGTAGCAATTATTTTATTTATTATGTGCATTTATTGGTGGA
TCAGTTATTTAGGTTTTCAAAAACAAGAAAAACTTAAAGAAAAAGTAGTATCACTCGAAGAAGAACTATTTGAAATGAAA
AACAAACAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACATGGGTACATCAAATCAAAACGCCAATCACTGC
ATCGCAACTATTGCTAGAACGTAATGAACCTAATGTTGCCAATCAAGTGAGACAAGAAATTGTACAAATTGATAACTATA
CTCGTTTAGCACTAAGTTACTTAAAATTACTTAATGAAGCCTCGGATATGACAATCACAGAGGTGAACATAGATGATTTA
ATTAAACCTTTAATTATGAAATATCGAATTCACTTTATTGAACAACATACTAAAATTCATTATCAATCTAATGATGATAG
TATCTTAACAGATGCACAATGGACTTCAATATTGATAGAACAGATACTGAATAACGCATTAAAATATGCACGTGGAAAAG
ATATTTGGATTGACTTTGACTCAACGTCTCAACAATTATCTATTAAAGATAACGGGATTGGTATTAGTCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTTAATGAATCCTCAAGCGGCATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTAACATCAGACTTGAATAAAGGTACACAATTTACAATTAGCT
TTCCAACGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.356

98.993

0.607

Multiple sequence alignment