Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   D3P10_RS01315 Genome accession   NZ_CP032159
Coordinates   265697..266362 (+) Length   221 a.a.
NCBI ID   WP_047211221.1    Uniprot ID   -
Organism   Staphylococcus warneri strain 22.1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 260697..271362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D3P10_RS01295 (D3P10_01295) - 261294..261743 (+) 450 WP_002467363.1 MarR family winged helix-turn-helix transcriptional regulator -
  D3P10_RS01300 (D3P10_01300) - 261978..263441 (+) 1464 WP_058709311.1 poly-gamma-glutamate hydrolase family protein -
  D3P10_RS01305 (D3P10_01305) - 263622..263723 (+) 102 WP_015364644.1 SE2200 family small protein -
  D3P10_RS01310 (D3P10_01310) - 263806..265260 (-) 1455 WP_049414579.1 alkaline phosphatase -
  D3P10_RS12515 - 265508..265675 (+) 168 WP_155115921.1 hypothetical protein -
  D3P10_RS01315 (D3P10_01315) braR 265697..266362 (+) 666 WP_047211221.1 response regulator transcription factor Regulator
  D3P10_RS01320 (D3P10_01320) braS 266368..267264 (+) 897 WP_047211220.1 sensor histidine kinase Regulator
  D3P10_RS01325 (D3P10_01325) - 267368..268114 (+) 747 WP_049414576.1 ABC transporter ATP-binding protein -
  D3P10_RS01330 (D3P10_01330) - 268132..270126 (+) 1995 WP_240431437.1 ABC transporter permease -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25499.62 Da        Isoelectric Point: 4.9722

>NTDB_id=314234 D3P10_RS01315 WP_047211221.1 265697..266362(+) (braR) [Staphylococcus warneri strain 22.1]
MKILIVEDDLVIAESLASELKKWNYDVKMAKQFSHVLDDFKDYLPDLVLLDINLPTLNGFHWCQEMRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNNELNVKGCKLIVDEAKLMFQDDVTQLSLTELQIVK
LLFQNEGKFVNRTALIEKCWESENYIDDNTLAVNMTRLRKKLSQIGLTDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=314234 D3P10_RS01315 WP_047211221.1 265697..266362(+) (braR) [Staphylococcus warneri strain 22.1]
ATGAAGATTTTGATAGTAGAAGATGACTTAGTCATTGCAGAAAGTTTAGCAAGTGAACTTAAGAAATGGAACTATGACGT
TAAGATGGCAAAACAGTTTTCGCATGTTTTAGATGATTTCAAAGACTATCTACCTGACCTAGTACTACTAGATATTAATT
TACCAACTTTAAATGGCTTCCATTGGTGCCAAGAAATGAGAAAAATCTCAAACGTACCTATTATATTTATTAGTTCAAGG
ACAGATAATATGGATCAAATAATGGCGATACAAATGGGTGGCGATGATTTTATTGAGAAACCATTTAATTTATCGTTAAC
AGTTGCTAAAGTACAAGCTTTATTACGACGAACTTATGATTTAGCTGTATCTAATAATGAATTAAATGTTAAGGGATGTA
AACTTATCGTTGATGAGGCTAAGTTAATGTTTCAAGATGATGTGACACAACTGTCTTTAACAGAACTTCAAATCGTTAAA
CTGTTGTTTCAAAATGAAGGTAAATTTGTAAATCGAACAGCTTTAATTGAAAAATGTTGGGAATCAGAGAATTATATTGA
TGATAATACTTTGGCTGTAAATATGACACGATTGCGAAAAAAATTAAGTCAAATTGGCTTAACAGATTTTATTGAAACGA
AGAAAAATGTGGGATATAGGGTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792


Multiple sequence alignment