Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   D2M30_RS05705 Genome accession   NZ_CP032146
Coordinates   1111262..1111918 (+) Length   218 a.a.
NCBI ID   WP_014470612.1    Uniprot ID   A0AAP7N9L0
Organism   Bacillus amyloliquefaciens strain YP6     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1106262..1116918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2M30_RS05680 (D2M30_05695) oppF 1106790..1107707 (+) 918 WP_045506975.1 oligopeptide ABC transporter ATP-binding protein OppF -
  D2M30_RS05685 (D2M30_05700) - 1107816..1109003 (+) 1188 WP_125122385.1 putative glycoside hydrolase -
  D2M30_RS05690 (D2M30_05705) - 1109121..1109699 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  D2M30_RS05695 (D2M30_05710) spx 1109877..1110272 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  D2M30_RS05700 (D2M30_05715) - 1110330..1110986 (-) 657 WP_125122386.1 TerC family protein -
  D2M30_RS05705 (D2M30_05720) mecA 1111262..1111918 (+) 657 WP_014470612.1 adaptor protein MecA Regulator
  D2M30_RS05710 (D2M30_05725) - 1112069..1113229 (+) 1161 WP_125122387.1 competence protein CoiA family protein -
  D2M30_RS05715 (D2M30_05730) pepF 1113458..1115287 (+) 1830 WP_125122388.1 oligoendopeptidase F Regulator
  D2M30_RS20535 (D2M30_1218) - 1115323..1115490 (-) 168 WP_016938224.1 hypothetical protein -
  D2M30_RS05720 (D2M30_05735) spxH 1115775..1116677 (-) 903 WP_013351835.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25982.77 Da        Isoelectric Point: 4.0828

>NTDB_id=314010 D2M30_RS05705 WP_014470612.1 1111262..1111918(+) (mecA) [Bacillus amyloliquefaciens strain YP6]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=314010 D2M30_RS05705 WP_014470612.1 1111262..1111918(+) (mecA) [Bacillus amyloliquefaciens strain YP6]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTCT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATCCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.908

100

0.899

Multiple sequence alignment