Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | D2M30_RS05590 | Genome accession | NZ_CP032146 |
| Coordinates | 1088994..1089947 (+) | Length | 317 a.a. |
| NCBI ID | WP_013351813.1 | Uniprot ID | A0AAP7TCS7 |
| Organism | Bacillus amyloliquefaciens strain YP6 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1083994..1094947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2M30_RS05560 (D2M30_05575) | argF | 1085804..1086760 (+) | 957 | WP_125122378.1 | ornithine carbamoyltransferase | - |
| D2M30_RS05565 (D2M30_05580) | - | 1086850..1087029 (+) | 180 | WP_013351809.1 | YjzC family protein | - |
| D2M30_RS05570 (D2M30_05585) | - | 1087070..1087258 (-) | 189 | WP_013351810.1 | YjzD family protein | - |
| D2M30_RS05580 (D2M30_05595) | - | 1087519..1088253 (+) | 735 | WP_045507014.1 | hypothetical protein | - |
| D2M30_RS05585 (D2M30_05600) | - | 1088334..1088900 (+) | 567 | WP_125122379.1 | hypothetical protein | - |
| D2M30_RS05590 (D2M30_05605) | med | 1088994..1089947 (+) | 954 | WP_013351813.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| D2M30_RS05595 (D2M30_05610) | comZ | 1089960..1090151 (+) | 192 | WP_013351814.1 | ComZ family protein | Regulator |
| D2M30_RS05600 (D2M30_05615) | - | 1090182..1090400 (-) | 219 | WP_013351815.1 | hypothetical protein | - |
| D2M30_RS05605 (D2M30_05620) | - | 1090566..1091504 (+) | 939 | WP_013351816.1 | beta-ketoacyl-ACP synthase III | - |
| D2M30_RS05610 (D2M30_05625) | fabF | 1091528..1092766 (+) | 1239 | WP_125122380.1 | beta-ketoacyl-ACP synthase II | - |
| D2M30_RS05615 (D2M30_05630) | - | 1092850..1093635 (+) | 786 | WP_125122381.1 | DUF2268 domain-containing protein | - |
| D2M30_RS05620 (D2M30_05635) | - | 1093809..1094795 (+) | 987 | WP_014470616.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35342.94 Da Isoelectric Point: 4.5494
>NTDB_id=314006 D2M30_RS05590 WP_013351813.1 1088994..1089947(+) (med) [Bacillus amyloliquefaciens strain YP6]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE
Nucleotide
Download Length: 954 bp
>NTDB_id=314006 D2M30_RS05590 WP_013351813.1 1088994..1089947(+) (med) [Bacillus amyloliquefaciens strain YP6]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGATGGCTTCATCAAAGGGGCGAAATATGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGACAACGGCAATGAGGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACTGTGCAAAATGTAGACAAAGCCTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGATGGCTTCATCAAAGGGGCGAAATATGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGACAACGGCAATGAGGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACTGTGCAAAATGTAGACAAAGCCTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
78.549 |
100 |
0.785 |