Detailed information NTG0031393

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SEZ_RS08265
• Genome accession: NC_011134
• Coordinates: 1739969..1740892 (-)
• Length: 307 a.a.
• NCBI ID: WP_012516278.1
• Uniprot ID: A0AAW3GKE0
• Organism: Streptococcus equi subsp. zooepidemicus MGCS10565
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1734969..1745892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEZ_RS08265 (Sez_1693)	amiF	1739969..1740892 (-)	924	WP_012516278.1	ATP-binding cassette domain-containing protein	Regulator
SEZ_RS08270 (Sez_1694)	amiE	1740885..1741955 (-)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
SEZ_RS08275 (Sez_1695)	amiD	1741964..1742890 (-)	927	WP_012516280.1	oligopeptide ABC transporter permease OppC	Regulator
SEZ_RS08280 (Sez_1696)	amiC	1742890..1744389 (-)	1500	WP_012516281.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34670.89 Da
• Isoelectric Point: 6.9308

>NTDB_id=31393 SEZ_RS08265 WP_012516278.1 1739969..1740892(-) (amiF) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNETSSGEIRYDGKIINGKKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEDERKEKIKQMMSEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKKIQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFV
NPVHPYTKSLLSAVPIPDPILERQKKLVVYHPEQHDYSVDKPSMVEIKPNHFVWANQAEAERYRKEL

Nucleotide

• Length: 924 bp

>NTDB_id=31393 SEZ_RS08265 WP_012516278.1 1739969..1740892(-) (amiF) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGTCTGAAAAATTAGTTGAAGTAAAAGACCTGGAGATTTCCTTTGGAGAGGGAAAGAAAAAGTTTGTTGCCGTTAAAAA
TGCCAATTTCTTTATCAATAAAGGAGAAACCTTTTCTCTTGTTGGAGAATCAGGCAGCGGAAAGACAACAATAGGTCGTG
CTATCATTGGCTTAAATGAAACAAGCTCAGGCGAAATCCGCTACGATGGTAAGATTATTAATGGTAAAAAATCAAAATCT
GAAGCTAATGAACTGATTAGAAAAATCCAAATGATTTTTCAAGACCCAGCAGCCAGCCTGAATGAGCGTGCAACGGTTGA
TTATATCATCTCAGAAGGCCTTTATAATTTTAACCTATTCAAAACAGAAGACGAACGTAAAGAAAAAATTAAACAGATGA
TGTCAGAGGTGGGCTTGCTTGCAGAGCACCTGACACGCTACCCTCATGAGTTTTCAGGTGGGCAGCGTCAGCGTATAGGC
ATTGCAAGAGCACTTGTAATGGATCCAGAGTTTGTCATTGCTGATGAGCCAATTTCAGCTCTTGATGTATCTGTTCGTGC
TCAGGTCTTGAACCTGTTGAAGAAAATACAGGCTGAAAAAGGCTTGACCTATTTATTCATCGCTCATGATTTATCGGTTG
TGCGTTTTATTTCAGATCGTATTGCTGTTATTCATAAAGGAGTAATTGTTGAAGTTGCTGAAACAGAAGAGCTTTTTGTT
AATCCTGTTCACCCTTATACCAAATCTCTGTTGTCAGCAGTACCAATTCCAGATCCCATTTTAGAGCGTCAAAAGAAATT
GGTGGTCTATCATCCAGAGCAGCATGACTATTCTGTTGACAAGCCATCAATGGTGGAAATCAAACCAAATCACTTCGTCT
GGGCTAACCAGGCAGAAGCGGAGCGTTACCGTAAAGAGCTTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	83.007	99.674	0.827
amiF	Streptococcus thermophilus LMD-9	82.68	99.674	0.824
amiF	Streptococcus salivarius strain HSISS4	82.68	99.674	0.824