Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CDG61_RS12835 Genome accession   NZ_CP032143
Coordinates   2615782..2616168 (-) Length   128 a.a.
NCBI ID   WP_087513331.1    Uniprot ID   A0A3B7M4U2
Organism   Acinetobacter sp. WCHAc010052     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2610782..2621168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG61_RS12820 (CDG61_12820) - 2612722..2614794 (-) 2073 WP_087513334.1 methyl-accepting chemotaxis protein -
  CDG61_RS12825 (CDG61_12825) - 2614836..2615372 (-) 537 WP_087549445.1 chemotaxis protein CheW -
  CDG61_RS12830 (CDG61_12830) - 2615376..2615744 (-) 369 WP_087513332.1 response regulator -
  CDG61_RS12835 (CDG61_12835) pilG 2615782..2616168 (-) 387 WP_087513331.1 twitching motility response regulator PilG Regulator
  CDG61_RS12840 (CDG61_12840) - 2616531..2617085 (+) 555 WP_087549651.1 hypothetical protein -
  CDG61_RS12845 (CDG61_12845) - 2617177..2618286 (+) 1110 WP_416240716.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14285.30 Da        Isoelectric Point: 4.6847

>NTDB_id=313874 CDG61_RS12835 WP_087513331.1 2615782..2616168(-) (pilG) [Acinetobacter sp. WCHAc010052]
MDDNKFQNLKVMVIDDSKTIRRTAETLLQREGCDVITAVDGFDALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNY
QNIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=313874 CDG61_RS12835 WP_087513331.1 2615782..2616168(-) (pilG) [Acinetobacter sp. WCHAc010052]
ATGGACGACAATAAATTCCAGAATCTAAAAGTAATGGTGATTGATGATTCAAAAACCATTCGTCGTACCGCAGAAACCCT
ACTTCAGCGTGAAGGGTGTGATGTGATTACGGCAGTCGATGGTTTTGATGCACTGTCCAAAATTGCAGATGCAAATCCTG
ACATCGTCTTTGTGGACATCATGATGCCGCGTCTTGATGGATATCAGACCTGTGCATTAATCAAGAACTCACAGAACTAT
CAGAATATTCCTGTTGTCATGTTGTCCAGTAAAGATGGATTATTTGATCAGGCGAAAGGTCGTGTTGTCGGTTCAGATGA
ATATCTGACAAAACCTTTCAGCAAAGATGAATTATTAAACGCAATTCGTAATCACGTTTCGGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(11-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3B7M4U2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

93.651

98.438

0.922
  vicR Streptococcus mutans UA159

41.88

91.406

0.383

Multiple sequence alignment