Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | CDG61_RS09935 | Genome accession | NZ_CP032143 |
| Coordinates | 1972650..1973033 (-) | Length | 127 a.a. |
| NCBI ID | WP_087512292.1 | Uniprot ID | A0A3B7LVX3 |
| Organism | Acinetobacter sp. WCHAc010052 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1967650..1978033
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG61_RS09905 (CDG61_09905) | tadA | 1967931..1968452 (-) | 522 | WP_087551011.1 | tRNA adenosine(34) deaminase TadA | - |
| CDG61_RS09910 (CDG61_09910) | - | 1968460..1969584 (-) | 1125 | WP_087551010.1 | enoyl-CoA hydratase/isomerase family protein | - |
| CDG61_RS09915 (CDG61_09915) | ung | 1969581..1970294 (-) | 714 | WP_087551009.1 | uracil-DNA glycosylase | - |
| CDG61_RS09920 (CDG61_09920) | - | 1970332..1970931 (-) | 600 | WP_087551008.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| CDG61_RS09925 (CDG61_09925) | gspK | 1971034..1972026 (-) | 993 | WP_087551007.1 | type II secretion system minor pseudopilin GspK | - |
| CDG61_RS09930 (CDG61_09930) | xcpW | 1972027..1972653 (-) | 627 | WP_087551006.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| CDG61_RS09935 (CDG61_09935) | xcpV | 1972650..1973033 (-) | 384 | WP_087512292.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| CDG61_RS09940 (CDG61_09940) | - | 1973020..1973580 (-) | 561 | WP_087551005.1 | pilus assembly FimT family protein | - |
| CDG61_RS09945 (CDG61_09945) | - | 1973589..1974203 (-) | 615 | WP_087551004.1 | TetR/AcrR family transcriptional regulator | - |
| CDG61_RS09950 (CDG61_09950) | - | 1974253..1975026 (-) | 774 | WP_087551003.1 | TatD family hydrolase | - |
| CDG61_RS09955 (CDG61_09955) | - | 1975052..1975393 (-) | 342 | WP_087512296.1 | PilZ domain-containing protein | - |
| CDG61_RS09960 (CDG61_09960) | - | 1975405..1976388 (-) | 984 | WP_087551002.1 | DNA polymerase III subunit delta' | - |
| CDG61_RS09965 (CDG61_09965) | kdsB | 1976404..1977165 (-) | 762 | WP_087551001.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14063.13 Da Isoelectric Point: 8.5051
>NTDB_id=313869 CDG61_RS09935 WP_087512292.1 1972650..1973033(-) (xcpV) [Acinetobacter sp. WCHAc010052]
MKKNKGFTLLEVMVALAIFATAAMALTKVAMQYTQATSNAVLRTKAQFVAMNAAAQMEINREWLEGTQSEQVEQQGENWQ
IDKSTQPTVSPDVQRVTVQVSLFNKETGKVEAGITNIVFFNYRIAAS
MKKNKGFTLLEVMVALAIFATAAMALTKVAMQYTQATSNAVLRTKAQFVAMNAAAQMEINREWLEGTQSEQVEQQGENWQ
IDKSTQPTVSPDVQRVTVQVSLFNKETGKVEAGITNIVFFNYRIAAS
Nucleotide
Download Length: 384 bp
>NTDB_id=313869 CDG61_RS09935 WP_087512292.1 1972650..1973033(-) (xcpV) [Acinetobacter sp. WCHAc010052]
ATGAAGAAAAATAAAGGATTTACCTTACTTGAAGTGATGGTTGCTCTCGCAATTTTTGCCACAGCCGCAATGGCGCTGAC
CAAAGTGGCGATGCAGTATACCCAGGCAACCTCAAATGCTGTACTGCGCACCAAAGCACAGTTTGTTGCAATGAATGCAG
CAGCGCAGATGGAAATCAACAGAGAATGGCTGGAGGGAACTCAGTCAGAACAGGTGGAACAACAGGGCGAAAACTGGCAG
ATTGATAAAAGTACTCAACCCACAGTCAGTCCTGATGTACAGCGTGTCACTGTTCAGGTGAGTCTGTTCAATAAGGAAAC
AGGTAAAGTCGAAGCCGGTATTACCAATATTGTGTTCTTTAATTATCGGATAGCTGCATCATGA
ATGAAGAAAAATAAAGGATTTACCTTACTTGAAGTGATGGTTGCTCTCGCAATTTTTGCCACAGCCGCAATGGCGCTGAC
CAAAGTGGCGATGCAGTATACCCAGGCAACCTCAAATGCTGTACTGCGCACCAAAGCACAGTTTGTTGCAATGAATGCAG
CAGCGCAGATGGAAATCAACAGAGAATGGCTGGAGGGAACTCAGTCAGAACAGGTGGAACAACAGGGCGAAAACTGGCAG
ATTGATAAAAGTACTCAACCCACAGTCAGTCCTGATGTACAGCGTGTCACTGTTCAGGTGAGTCTGTTCAATAAGGAAAC
AGGTAAAGTCGAAGCCGGTATTACCAATATTGTGTTCTTTAATTATCGGATAGCTGCATCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
72.581 |
97.638 |
0.709 |