Detailed information NTG0313823

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CDG60_RS10330
• Genome accession: NZ_CP032134
• Coordinates: 1964118..1964744 (-)
• Length: 208 a.a.
• NCBI ID: WP_087512291.1
• Uniprot ID: A0A3B7LWY2
• Organism: Acinetobacter chinensis strain WCHAc010005
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1959118..1969744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG60_RS10300 (CDG60_10300)	-	1959509..1959943 (-)	435	WP_171405499.1	SRPBCC family protein	-
CDG60_RS10305 (CDG60_10305)	tadA	1960022..1960543 (-)	522	WP_087512286.1	tRNA adenosine(34) deaminase TadA	-
CDG60_RS10310 (CDG60_10310)	-	1960551..1961675 (-)	1125	WP_087512287.1	enoyl-CoA hydratase/isomerase family protein	-
CDG60_RS10315 (CDG60_10315)	ung	1961672..1962385 (-)	714	WP_087512288.1	uracil-DNA glycosylase	-
CDG60_RS10320 (CDG60_10320)	-	1962423..1963022 (-)	600	WP_087512289.1	6-carboxytetrahydropterin synthase	-
CDG60_RS10325 (CDG60_10325)	gspK	1963125..1964117 (-)	993	WP_087512290.1	type II secretion system minor pseudopilin GspK	-
CDG60_RS10330 (CDG60_10330)	xcpW	1964118..1964744 (-)	627	WP_087512291.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CDG60_RS10335 (CDG60_10335)	xcpV	1964741..1965124 (-)	384	WP_087512292.1	type II secretion system minor pseudopilin GspI	Machinery gene
CDG60_RS10340 (CDG60_10340)	-	1965111..1965671 (-)	561	WP_087512293.1	Tfp pilus assembly protein FimT/FimU	-
CDG60_RS10345 (CDG60_10345)	-	1965680..1966294 (-)	615	WP_087512294.1	TetR/AcrR family transcriptional regulator	-
CDG60_RS10350 (CDG60_10350)	-	1966344..1967117 (-)	774	WP_087512295.1	TatD family hydrolase	-
CDG60_RS10355 (CDG60_10355)	-	1967143..1967484 (-)	342	WP_087512296.1	PilZ domain-containing protein	-
CDG60_RS10360 (CDG60_10360)	-	1967496..1968479 (-)	984	WP_087512297.1	DNA polymerase III subunit delta'	-
CDG60_RS10365 (CDG60_10365)	kdsB	1968495..1969256 (-)	762	WP_087512298.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 208 a.a.
• Molecular weight: 23313.68 Da
• Isoelectric Point: 5.0727

>NTDB_id=313823 CDG60_RS10330 WP_087512291.1 1964118..1964744(-) (xcpW) [Acinetobacter chinensis strain WCHAc010005]
MSRSKGFTLVELLVAIAIFAVLSALGWKVFDYLSKVSERNEMHEANLSALQEAHQQILRDSLQIAPLTANIKGETAPALI
LQNGVLIFSKTGVTDPLAQGTPPDERVEYRYRADEKKLYRLKYSYLNQTGQEQPVSSVLLENVEQYDVSVLNPAELKSWP
EATADAENVQQKALLPRGIMLSLTVQGISYQWLYSLLNTDFLKQEAVK

Nucleotide

• Length: 627 bp

>NTDB_id=313823 CDG60_RS10330 WP_087512291.1 1964118..1964744(-) (xcpW) [Acinetobacter chinensis strain WCHAc010005]
ATGAGCAGGTCAAAAGGGTTTACCCTTGTTGAGCTGCTGGTTGCAATTGCAATTTTCGCAGTGCTCTCTGCACTCGGCTG
GAAAGTGTTTGATTATCTCTCGAAGGTCAGTGAGCGTAATGAAATGCATGAGGCGAATTTATCCGCCTTACAGGAAGCCC
ATCAGCAGATTCTCAGAGACAGTCTTCAGATTGCACCATTAACTGCAAATATCAAAGGTGAAACAGCTCCTGCGCTGATT
CTGCAGAATGGTGTGCTGATTTTCAGTAAAACAGGTGTTACAGATCCTCTGGCCCAGGGCACACCACCCGATGAGCGGGT
GGAATACCGTTATCGTGCAGATGAAAAAAAACTCTATAGATTAAAATACAGTTACCTGAATCAGACAGGGCAGGAACAGC
CAGTTTCGAGCGTGCTGCTTGAAAATGTTGAACAGTATGATGTTTCTGTCCTGAATCCGGCAGAGCTGAAAAGCTGGCCT
GAGGCGACGGCAGATGCAGAAAATGTTCAGCAGAAAGCATTGTTACCCAGGGGAATCATGCTGAGTCTGACCGTACAGGG
GATATCCTATCAGTGGTTGTATAGCCTGTTGAATACAGACTTTCTGAAACAGGAAGCCGTAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (59-188)

3D structure

• AlphaFold DB: A0A3B7LWY2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	58.454	99.519	0.582