Detailed information NTG0031376

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: SEZ_RS05275
• Genome accession: NC_011134
• Coordinates: 1111080..1112309 (-)
• Length: 409 a.a.
• NCBI ID: WP_012515695.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus MGCS10565
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1106080..1117309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEZ_RS05265 (Sez_1073)	-	1107098..1110109 (-)	3012	WP_012515693.1	leucine-rich repeat domain-containing protein	-
SEZ_RS05270 (Sez_1074)	yihA	1110471..1111070 (-)	600	WP_041785521.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
SEZ_RS05275 (Sez_1075)	clpX	1111080..1112309 (-)	1230	WP_012515695.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
SEZ_RS09800 (Sez_1076)	-	1112345..1112515 (-)	171	WP_012515696.1	hypothetical protein	-
SEZ_RS05285 (Sez_1077)	-	1112535..1113032 (-)	498	WP_041785524.1	dihydrofolate reductase	-
SEZ_RS05290 (Sez_1078)	-	1113113..1113952 (-)	840	WP_012515698.1	thymidylate synthase	-
SEZ_RS05295 (Sez_1079)	-	1114137..1115312 (+)	1176	WP_012515699.1	hydroxymethylglutaryl-CoA synthase	-
SEZ_RS05300 (Sez_1080)	-	1115299..1116582 (+)	1284	WP_041785880.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45217.72 Da
• Isoelectric Point: 4.5698

>NTDB_id=31376 SEZ_RS05275 WP_012515695.1 1111080..1112309(-) (clpX) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MAGNRSNDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLSDLTEVPKPKELLDILNQYVIGQER
AKRALSVAVYNHYKRISFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDDNASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLNTEDLIRI
LTEPRNALVKQYQALLSYDGVELEFEKSALEAIAGRAIERKTGARGLRSIIEETMLDIMFEVPSQEEVTKVRITKEAVEG
QSKPILEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=31376 SEZ_RS05275 WP_012515695.1 1111080..1112309(-) (clpX) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGGCAGGAAATCGTAGTAACGATATTAAGGTTCATTGCTCGTTTTGCGGCAAGAGCCAAGACGAAGTGAAAAAAATTAT
TGCAGGCAACAATGTCTTTATTTGTAATGAATGCGTTGCCTTGTCACAAGAAATCATCAAAGAAGAATTGGCAGAGGAGG
TTCTCTCTGATCTGACTGAGGTACCAAAGCCAAAAGAGCTCCTTGATATTTTAAATCAATACGTCATTGGGCAGGAGCGT
GCTAAGAGAGCCTTATCAGTTGCAGTTTACAACCACTACAAGAGGATTTCATTTACTGAGAGTCGTGACGATGATGATGT
GGATTTGCAAAAGTCAAACATTCTGATGATTGGACCAACAGGCTCAGGTAAGACCTTTTTAGCCCAGACTCTGGCTAAGA
GCCTTAATGTTCCATTTGCTATTGCTGATGCAACCTCTTTGACTGAAGCAGGCTATGTCGGAGAGGATGTGGAAAATATC
CTTCTGAAATTAATTCAAGCCGCTGATTACAATGTTGAACGTGCAGAGCGCGGCATTATTTATGTTGACGAAATTGATAA
AATCGCTAAAAAAGGTGAGAATGTCTCCATTACTCGTGATGTATCAGGAGAGGGTGTCCAACAAGCCTTGCTAAAAATTA
TTGAGGGAACGGTTGCTAGTGTTCCACCGCAAGGTGGTCGTAAGCACCCAAACCAAGAGATGATACAGATTGATACCAAA
AATATCTTGTTTATCGTCGGAGGCGCCTTTGATGGTATCGAAGAAATTGTCAAGCAGCGCTTGGGAGAAAAGATCATTGG
CTTTGGGCAAAATAGTCGAAAGATTGATGACAATGCTTCCTATATGCAGGAGATCATTGCTGAGGATATTCAAAAATTTG
GTCTGATTCCCGAATTTATTGGACGCTTGCCTGTTGTAGCAGCGCTTGAGCAGCTTAATACTGAGGATTTGATTCGTATT
TTAACAGAGCCTAGAAATGCCCTTGTGAAGCAATATCAAGCCTTATTGTCATATGATGGCGTAGAGCTTGAGTTTGAAAA
GAGTGCTCTGGAGGCTATTGCAGGCAGGGCTATTGAGCGCAAGACTGGTGCACGTGGTCTGAGGTCTATTATTGAAGAAA
CCATGCTGGATATCATGTTTGAGGTGCCAAGCCAAGAGGAAGTAACCAAGGTACGCATTACTAAGGAAGCTGTCGAAGGT
CAATCAAAGCCTATTTTAGAGATAGCCTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.753	100	0.888
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.352	98.044	0.582