Detailed information NTG0031358

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: SEZ_RS01540
• Genome accession: NC_011134
• Coordinates: 302514..303560 (+)
• Length: 348 a.a.
• NCBI ID: WP_012514939.1
• Uniprot ID: B4U0X1
• Organism: Streptococcus equi subsp. zooepidemicus MGCS10565
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 297514..308560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEZ_RS01525 (Sez_0279)	-	298721..300379 (+)	1659	WP_012514936.1	peptide ABC transporter substrate-binding protein	-
SEZ_RS01530 (Sez_0280)	-	300546..301460 (+)	915	WP_012514937.1	ABC transporter permease	-
SEZ_RS01535 (Sez_0281)	-	301470..302501 (+)	1032	WP_012514938.1	ABC transporter permease	-
SEZ_RS01540 (Sez_0282)	oppD	302514..303560 (+)	1047	WP_012514939.1	ABC transporter ATP-binding protein	Regulator
SEZ_RS01545 (Sez_0283)	amiF	303560..304495 (+)	936	WP_012514940.1	ATP-binding cassette domain-containing protein	Regulator
SEZ_RS01550 (Sez_0284)	rnjA	305117..306799 (-)	1683	WP_012514941.1	ribonuclease J1	-
SEZ_RS01555 (Sez_0285)	-	306801..307031 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
SEZ_RS01560 (Sez_0286)	tsaB	307317..308015 (+)	699	WP_012514943.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
SEZ_RS01565 (Sez_0287)	rimI	308018..308443 (+)	426	WP_012514944.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38543.46 Da
• Isoelectric Point: 6.6666

>NTDB_id=31358 SEZ_RS01540 WP_012514939.1 302514..303560(+) (oppD) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQAQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=31358 SEZ_RS01540 WP_012514939.1 302514..303560(+) (oppD) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TGATATCAGCTTTGAGCTAAAAAAGGGAGAGACTCTTGCGATTGTGGGAGAATCAGGCTCAGGAAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAAGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCCATGATCTTTCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAACTGATGAAGGATATTCAGGCTCAGACCGCATCATCGATTATTTTTATTACAC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGTGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAAGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: B4U0X1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.539	99.713	0.793
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537