Detailed information NTG0031359

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SEZ_RS01545
• Genome accession: NC_011134
• Coordinates: 303560..304495 (+)
• Length: 311 a.a.
• NCBI ID: WP_012514940.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus MGCS10565
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 298560..309495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SEZ_RS01525 (Sez_0279)	-	298721..300379 (+)	1659	WP_012514936.1	peptide ABC transporter substrate-binding protein	-
SEZ_RS01530 (Sez_0280)	-	300546..301460 (+)	915	WP_012514937.1	ABC transporter permease	-
SEZ_RS01535 (Sez_0281)	-	301470..302501 (+)	1032	WP_012514938.1	ABC transporter permease	-
SEZ_RS01540 (Sez_0282)	oppD	302514..303560 (+)	1047	WP_012514939.1	ABC transporter ATP-binding protein	Regulator
SEZ_RS01545 (Sez_0283)	amiF	303560..304495 (+)	936	WP_012514940.1	ATP-binding cassette domain-containing protein	Regulator
SEZ_RS01550 (Sez_0284)	rnjA	305117..306799 (-)	1683	WP_012514941.1	ribonuclease J1	-
SEZ_RS01555 (Sez_0285)	-	306801..307031 (-)	231	WP_012514942.1	DNA-dependent RNA polymerase subunit epsilon	-
SEZ_RS01560 (Sez_0286)	tsaB	307317..308015 (+)	699	WP_012514943.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
SEZ_RS01565 (Sez_0287)	rimI	308018..308443 (+)	426	WP_012514944.1	ribosomal protein S18-alanine N-acetyltransferase	-
SEZ_RS01570 (Sez_0288)	tsaD	308433..309449 (+)	1017	WP_012514945.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35067.17 Da
• Isoelectric Point: 8.3565

>NTDB_id=31359 SEZ_RS01545 WP_012514940.1 303560..304495(+) (amiF) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERRRIAEVYDPSQELDGQERQMYEITPGHFVLATQAEADQYRAERGL

Nucleotide

• Length: 936 bp

>NTDB_id=31359 SEZ_RS01545 WP_012514940.1 303560..304495(+) (amiF) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAGGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACGA
CAGTTGGTCGAGCTATTTTGAAACTGTATGACATTAGTGATGGTGAGATTATCTTTAACGGAGAAAATGTCTCCCAATTA
AAAGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCACAAATGATCTTCCAAGATCCTCAGGCTAGTCTGAACGGCCGTAT
GAAAATTAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AGGAGCTGTTAAAGCTTGTTGGGCTCAATCAGGACCATTTGACGCGCTACCCACATGAATTTTCCGGTGGTCAACGCCAG
CGCATTGGCATTGCGCGTGCCTTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAGAAGCGCGGCTTGACCTATCTCTTTATCGCACACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCGGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAG
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGTATGAAATCACTCCTGGGCATT
TTGTTTTAGCGACGCAGGCCGAAGCCGATCAGTATCGAGCAGAGCGTGGCCTCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.922	98.392	0.531
amiF	Streptococcus thermophilus LMG 18311	53.595	98.392	0.527
amiF	Streptococcus salivarius strain HSISS4	53.268	98.392	0.524