Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   D2E16_RS11085 Genome accession   NZ_CP032064
Coordinates   2287391..2288650 (-) Length   419 a.a.
NCBI ID   WP_192369506.1    Uniprot ID   -
Organism   Streptococcus suis strain YSJ17     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2282391..2293650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2E16_RS11065 (D2E16_11415) dhaK 2282728..2283717 (+) 990 WP_104931048.1 dihydroxyacetone kinase subunit DhaK -
  D2E16_RS11070 (D2E16_11420) dhaL 2283728..2284303 (+) 576 WP_192369508.1 dihydroxyacetone kinase subunit DhaL -
  D2E16_RS11075 (D2E16_11425) dhaM 2284300..2284674 (+) 375 WP_192369507.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  D2E16_RS11080 (D2E16_11430) - 2284720..2286573 (-) 1854 WP_029176162.1 proline--tRNA ligase -
  D2E16_RS11085 (D2E16_11435) eeP 2287391..2288650 (-) 1260 WP_192369506.1 M50 family metallopeptidase Regulator
  D2E16_RS11090 (D2E16_11440) - 2288660..2289466 (-) 807 WP_192369505.1 phosphatidate cytidylyltransferase -
  D2E16_RS11095 (D2E16_11445) - 2289476..2290231 (-) 756 WP_012775352.1 isoprenyl transferase -
  D2E16_RS11100 (D2E16_11450) yajC 2290346..2290669 (-) 324 WP_024377336.1 preprotein translocase subunit YajC -
  D2E16_RS11105 (D2E16_11460) - 2290930..2292222 (-) 1293 WP_024377335.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44875.22 Da        Isoelectric Point: 5.6974

>NTDB_id=313550 D2E16_RS11085 WP_192369506.1 2287391..2288650(-) (eeP) [Streptococcus suis strain YSJ17]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGILIFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=313550 D2E16_RS11085 WP_192369506.1 2287391..2288650(-) (eeP) [Streptococcus suis strain YSJ17]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAAACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGGAAGTTGATAACCAACTTTGCTGGTCCCATGAATAACTTTATTTTAGGGATTCTAATATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCGGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGATAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTAAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCAGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATGCGTGTATTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65

100

0.652

  eeP Streptococcus thermophilus LMG 18311

65

100

0.652


Multiple sequence alignment