Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AhaeINNSZ174_RS02145 Genome accession   NZ_CP031998
Coordinates   465648..467873 (-) Length   741 a.a.
NCBI ID   WP_125316834.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain INNSZ174     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 460648..472873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AhaeINNSZ174_RS02120 (AhaeINNSZ174_02130) - 460888..461214 (-) 327 WP_004637727.1 chaperone modulator CbpM -
  AhaeINNSZ174_RS02125 (AhaeINNSZ174_02135) - 461226..462185 (-) 960 WP_005088047.1 DnaJ C-terminal domain-containing protein -
  AhaeINNSZ174_RS02130 (AhaeINNSZ174_02140) - 462349..462699 (+) 351 WP_004637729.1 hypothetical protein -
  AhaeINNSZ174_RS02135 (AhaeINNSZ174_02145) - 462809..463681 (-) 873 WP_005083783.1 Hsp33 family molecular chaperone HslO -
  AhaeINNSZ174_RS02140 (AhaeINNSZ174_02150) - 463790..465607 (-) 1818 WP_005088050.1 cation:proton antiporter -
  AhaeINNSZ174_RS02145 (AhaeINNSZ174_02155) priA 465648..467873 (-) 2226 WP_125316834.1 primosomal protein N' Machinery gene
  AhaeINNSZ174_RS02150 (AhaeINNSZ174_02160) gspF 468022..469227 (+) 1206 WP_005083777.1 type II secretion system inner membrane protein GspF -
  AhaeINNSZ174_RS02155 (AhaeINNSZ174_02165) gspG 469227..469757 (+) 531 WP_005088059.1 type II secretion system major pseudopilin GspG -
  AhaeINNSZ174_RS02160 (AhaeINNSZ174_02170) - 470021..470365 (+) 345 WP_005088060.1 hypothetical protein -
  AhaeINNSZ174_RS02165 (AhaeINNSZ174_02175) lnt 470487..472046 (-) 1560 WP_005088063.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84312.30 Da        Isoelectric Point: 8.5587

>NTDB_id=313246 AhaeINNSZ174_RS02145 WP_125316834.1 465648..467873(-) (priA) [Acinetobacter haemolyticus strain INNSZ174]
MPSENSNAILYRIRVALPVYVYDTFDYTVSAEQYQQAQIGARVAVSFGRQNLVGIIVEKIDPNEVFTGQFKLKAITELLD
KEAILDQHVLTLMTWSAQYYQFPIGEVMQSALPTLLRQGRALDILFHLWKIVPNDDPNALLKRSQKQYDAYQILKIHPHG
TTENVLNLSGVETATLKALEKKGLVECCLEPHDFSPTPVQLAQVPLTANEDQKRAIQQILKEQHHYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTVARFKSRFHCDIALLHSGLNDSKRLQAWQHAQTGKASIVIGTRSAIYTPL
PHLGLIILDEEHDLSYKQQEGFRYHTRDVALYRGYLQHCPVILGSATPSIDSYHLVESGKLHLLELNQRAGVAVLPKMHV
IDLKIAKKKHGISQNLIEQIKLTLERKEQVLIFLNRRGYAPILMCESCGWQANCPHCDAHFTLHSQPYHYLHCHHCGTIN
RLPDHCPACQKQSLKTIGAGTAKLEEHLQELFPHNEVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFPH
VTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGNVYLQSLRPDHPMLTTLIEHDYRTVAKQMLAERKLAML
PPYRYTVLVRVESKDREYSQNFLADIAQQLRTMAGDLVDIWGPIPAPMERKAGRYRAHMVILSADRAKLHFYLRQWWQQV
VHLPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=313246 AhaeINNSZ174_RS02145 WP_125316834.1 465648..467873(-) (priA) [Acinetobacter haemolyticus strain INNSZ174]
ATGCCTAGCGAAAATTCTAACGCCATTTTGTACCGTATTCGAGTTGCCCTACCCGTATATGTGTATGACACGTTTGACTA
TACGGTCAGTGCCGAACAGTATCAACAAGCACAGATTGGAGCGCGTGTTGCAGTGTCGTTCGGACGACAAAATCTCGTAG
GTATCATTGTTGAAAAAATTGATCCCAATGAAGTTTTCACAGGTCAATTTAAACTGAAAGCAATTACTGAATTACTTGAT
AAAGAAGCAATATTAGATCAACACGTTTTAACTTTGATGACATGGTCTGCCCAGTACTATCAATTCCCAATTGGCGAAGT
GATGCAAAGTGCCCTTCCCACACTACTCAGGCAAGGACGTGCATTAGACATTTTATTTCATCTGTGGAAAATCGTGCCAA
ATGATGATCCGAATGCATTATTGAAGCGCTCACAAAAACAATATGATGCGTATCAAATCTTAAAAATACATCCTCATGGC
ACAACCGAAAATGTCTTGAACCTCAGTGGTGTTGAAACTGCAACACTGAAAGCTTTAGAAAAGAAAGGGTTGGTTGAATG
TTGTCTGGAACCGCATGATTTTAGCCCCACACCTGTACAATTGGCGCAAGTACCACTCACAGCCAATGAGGATCAAAAAA
GAGCGATTCAACAAATCCTCAAAGAGCAGCATCATTACCAAGCATTTTTACTGGATGGCTTAACAGGCAGTGGCAAAACT
GAAGTTTATCTGCAAGTCATGCATGAAGTATTAAAGCAGGGTAAGCAGGTGTTGGTACTGGTTCCAGAAATCGGCCTTAC
CCCTCAAACTGTCGCTCGCTTTAAATCACGGTTTCATTGTGATATTGCTTTATTACACTCAGGGTTAAATGACTCGAAGC
GCTTACAAGCCTGGCAGCATGCACAAACAGGGAAAGCGTCCATTGTGATCGGGACCCGTTCTGCGATCTACACGCCACTT
CCTCATCTTGGACTGATTATCCTTGATGAAGAGCATGATCTTTCATATAAGCAGCAAGAAGGCTTTCGTTATCATACCCG
TGATGTAGCACTCTACAGAGGATACTTACAACACTGTCCTGTGATTCTTGGATCTGCAACACCGAGTATCGATAGCTATC
ATCTGGTCGAGTCAGGCAAACTACATCTACTGGAACTCAATCAACGTGCTGGCGTCGCTGTCCTGCCTAAAATGCATGTG
ATTGATTTAAAAATTGCCAAGAAAAAACATGGTATCAGCCAAAATTTAATTGAGCAGATCAAACTCACCTTAGAACGCAA
AGAACAGGTGTTGATCTTTCTCAACCGTCGGGGTTATGCACCGATTCTGATGTGTGAAAGTTGTGGTTGGCAAGCCAATT
GCCCCCATTGTGATGCGCATTTCACCCTTCATTCTCAGCCTTATCATTATTTACATTGTCATCATTGCGGCACCATCAAT
CGCCTCCCCGATCATTGCCCAGCATGCCAAAAACAAAGTTTAAAAACGATTGGCGCTGGAACGGCAAAACTTGAAGAGCA
TTTACAAGAGTTATTTCCTCACAATGAAGTGATTCGAGTTGATCGTGACAGTACCAGCCGTGTCGGAAGTTGGCAGAAAA
TTTATGACCGTATCCAACAAAATAAACCGAGTATTTTATTGGGCACACAAATGCTTGCTAAAGGACATCATTTCCCACAT
GTAACTTTGGTGGCTATTTTAGATATTGACGCTGGTTTACTGAGCGTGGATATCCGCGCCCCTGAACGTACCGCACAATT
AATAGTACAAGTGGCCGGACGCGCTGGACGAGGCGAACATAAAGGGAATGTCTATTTACAAAGTCTTCGCCCTGATCATC
CTATGCTCACCACATTAATTGAACATGACTATCGTACGGTTGCCAAACAAATGCTGGCTGAGCGTAAACTTGCAATGCTC
CCTCCATATCGTTATACAGTATTGGTACGTGTTGAATCGAAAGATCGAGAATATAGCCAGAACTTTTTGGCGGATATTGC
GCAACAACTGAGAACAATGGCTGGCGATTTAGTTGATATTTGGGGGCCAATTCCCGCACCGATGGAACGTAAAGCTGGAC
GTTATCGTGCCCACATGGTGATTTTGTCGGCCGATCGCGCCAAACTGCATTTTTATTTGCGTCAATGGTGGCAACAAGTG
GTACATTTACCTCGTCAGCACCAACTCAGGCTATCCATCGATGTTGATCCACAAGAGTTTAGTTAG

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(210-371)

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

3DNA-binding domain (3BD) (PriA_3primeBD)

(14-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

82.449

99.19

0.818

Multiple sequence alignment