Detailed information NTG0313243

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AhaeINNSZ174_RS01905
• Genome accession: NZ_CP031998
• Coordinates: 408147..409007 (-)
• Length: 286 a.a.
• NCBI ID: WP_005083855.1
• Uniprot ID: N9F152
• Organism: Acinetobacter haemolyticus strain INNSZ174
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 403147..414007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AhaeINNSZ174_RS01880 (AhaeINNSZ174_01885)	recN	403416..405077 (-)	1662	WP_005087998.1	DNA repair protein RecN	-
AhaeINNSZ174_RS01885 (AhaeINNSZ174_01890)	-	405411..405737 (+)	327	WP_004637677.1	pyrimidine/purine nucleoside phosphorylase	-
AhaeINNSZ174_RS01890 (AhaeINNSZ174_01895)	rlmB	405846..406592 (+)	747	WP_004637678.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
AhaeINNSZ174_RS01895 (AhaeINNSZ174_01905)	-	406632..407543 (+)	912	WP_017394516.1	DMT family transporter	-
AhaeINNSZ174_RS01900 (AhaeINNSZ174_01910)	coaE	407540..408145 (-)	606	WP_005088002.1	dephospho-CoA kinase	-
AhaeINNSZ174_RS01905 (AhaeINNSZ174_01915)	pilD	408147..409007 (-)	861	WP_005083855.1	prepilin peptidase	Machinery gene
AhaeINNSZ174_RS01910 (AhaeINNSZ174_01920)	pilC	409007..410233 (-)	1227	WP_005083853.1	type II secretion system F family protein	Machinery gene
AhaeINNSZ174_RS01915 (AhaeINNSZ174_01925)	pilB	410258..411973 (-)	1716	WP_005083851.1	type IV-A pilus assembly ATPase PilB	Machinery gene
AhaeINNSZ174_RS01920 (AhaeINNSZ174_01930)	tpiA	412350..413141 (+)	792	WP_005088004.1	triose-phosphate isomerase	-
AhaeINNSZ174_RS01925 (AhaeINNSZ174_01935)	secG	413154..413483 (+)	330	WP_004637686.1	preprotein translocase subunit SecG	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32075.38 Da
• Isoelectric Point: 6.6694

>NTDB_id=313243 AhaeINNSZ174_RS01905 WP_005083855.1 408147..409007(-) (pilD) [Acinetobacter haemolyticus strain INNSZ174]
MQQFLNYFIENPTALYLAVGLFSLCIGSFLNVVIFRTPRMMEQEWQQECQMLLHPEQPIIEEEKLTLSHPASTCPKCHTP
IRWYQNIPVISWLVLRGKCGACQNPISIRYPLIELLTMGCSLVVVAVFGPTLQMLFGLVLTWVLITLTFIDFDTQLLPDR
FTLPLAALGLAINSFAIYTTANSAIWGYVIGFLCLWIVYYLFKIFTGKEGMGYGDFKLLAALGAWMGPMLLPLIVLLSSV
VGAIIGIILLKMRGENQPFAFGPYIAIAGWIAFLWGDQIMKVYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=313243 AhaeINNSZ174_RS01905 WP_005083855.1 408147..409007(-) (pilD) [Acinetobacter haemolyticus strain INNSZ174]
ATGCAGCAATTCTTAAATTATTTTATCGAAAACCCAACTGCACTTTATCTAGCAGTTGGGCTTTTTAGTTTATGTATTGG
TAGCTTTCTGAATGTTGTTATTTTCCGAACGCCAAGAATGATGGAGCAGGAATGGCAACAAGAATGCCAAATGCTACTCC
ATCCAGAACAACCTATCATTGAAGAAGAAAAGCTGACTTTAAGTCACCCTGCATCAACTTGCCCTAAGTGCCACACCCCT
ATCCGCTGGTATCAAAATATCCCAGTGATCAGCTGGTTAGTACTCCGTGGTAAATGCGGTGCCTGTCAAAACCCGATTAG
TATTCGTTACCCATTGATCGAGTTATTGACCATGGGATGCTCTCTAGTGGTCGTTGCTGTTTTTGGTCCTACCCTCCAAA
TGCTATTCGGTTTAGTTCTGACTTGGGTGTTAATTACCCTTACTTTTATTGATTTTGATACACAATTGCTTCCAGACCGC
TTTACACTCCCATTGGCAGCACTCGGTTTAGCCATTAATAGTTTTGCGATCTACACCACAGCAAACTCAGCAATTTGGGG
TTATGTGATTGGCTTCCTTTGCCTTTGGATTGTTTATTATCTTTTTAAAATATTTACTGGCAAAGAGGGTATGGGCTATG
GCGATTTTAAATTACTGGCTGCATTAGGGGCTTGGATGGGTCCAATGCTCTTGCCTTTAATTGTGTTACTTTCTTCTGTT
GTCGGTGCAATTATTGGTATCATCTTATTGAAAATGCGCGGTGAAAATCAGCCCTTTGCTTTTGGCCCCTATATTGCAAT
TGCAGGCTGGATCGCATTTTTATGGGGTGATCAAATTATGAAAGTTTATTTAGGTGGCTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

3D structure

• AlphaFold DB: N9F152

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	84.965	100	0.85
pilD	Acinetobacter baumannii D1279779	83.916	100	0.839
pilD	Vibrio cholerae strain A1552	55.97	93.706	0.524
pilD	Vibrio campbellii strain DS40M4	54.135	93.007	0.503
pilD	Neisseria gonorrhoeae MS11	47.253	95.455	0.451