Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | Ahae2126ch_RS07660 | Genome accession | NZ_CP031991 |
| Coordinates | 1584105..1584449 (+) | Length | 114 a.a. |
| NCBI ID | WP_042110486.1 | Uniprot ID | - |
| Organism | Acinetobacter haemolyticus strain 2126ch | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1579105..1589449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ahae2126ch_RS07630 (Ahae2126ch_07700) | - | 1579733..1580716 (+) | 984 | WP_004639309.1 | DNA polymerase III subunit delta' | - |
| Ahae2126ch_RS07635 (Ahae2126ch_07705) | - | 1580860..1581168 (+) | 309 | WP_004639308.1 | hypothetical protein | - |
| Ahae2126ch_RS07640 (Ahae2126ch_07710) | - | 1581491..1581835 (+) | 345 | WP_004639306.1 | PilZ domain-containing protein | - |
| Ahae2126ch_RS07645 (Ahae2126ch_07715) | - | 1581856..1582629 (+) | 774 | WP_005080456.1 | TatD family hydrolase | - |
| Ahae2126ch_RS07650 (Ahae2126ch_07720) | - | 1582671..1583276 (+) | 606 | WP_017394545.1 | TetR/AcrR family transcriptional regulator | - |
| Ahae2126ch_RS07655 (Ahae2126ch_07725) | - | 1583291..1583902 (+) | 612 | WP_005080458.1 | type II secretion system protein | - |
| Ahae2126ch_RS07660 (Ahae2126ch_07730) | xcpV | 1584105..1584449 (+) | 345 | WP_042110486.1 | type II secretion system protein | Machinery gene |
| Ahae2126ch_RS07665 (Ahae2126ch_07735) | xcpW | 1584455..1585174 (+) | 720 | WP_005080462.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| Ahae2126ch_RS07670 (Ahae2126ch_07740) | gspK | 1585176..1586153 (+) | 978 | WP_004639300.1 | type II secretion system minor pseudopilin GspK | - |
| Ahae2126ch_RS07675 (Ahae2126ch_07745) | - | 1586239..1586835 (+) | 597 | WP_017394547.1 | 6-carboxytetrahydropterin synthase | - |
| Ahae2126ch_RS07680 (Ahae2126ch_07750) | ung | 1586882..1587595 (+) | 714 | WP_005090364.1 | uracil-DNA glycosylase | - |
| Ahae2126ch_RS07685 (Ahae2126ch_07755) | - | 1587592..1588716 (+) | 1125 | WP_171055793.1 | enoyl-CoA hydratase/isomerase family protein | - |
| Ahae2126ch_RS07690 (Ahae2126ch_07760) | tadA | 1588721..1589233 (+) | 513 | WP_005080470.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12655.56 Da Isoelectric Point: 6.4632
>NTDB_id=313216 Ahae2126ch_RS07660 WP_042110486.1 1584105..1584449(+) (xcpV) [Acinetobacter haemolyticus strain 2126ch]
MVALAIFAVAAIALTKIAMQYTQATSNAILRTKAQFVAMNEVAMMEINKEWLDGTQSKQITSQGETWQIDKKAQATISPK
VQRIELQVSLFNVDQDKVEAGVGHLVFFNHQTES
MVALAIFAVAAIALTKIAMQYTQATSNAILRTKAQFVAMNEVAMMEINKEWLDGTQSKQITSQGETWQIDKKAQATISPK
VQRIELQVSLFNVDQDKVEAGVGHLVFFNHQTES
Nucleotide
Download Length: 345 bp
>NTDB_id=313216 Ahae2126ch_RS07660 WP_042110486.1 1584105..1584449(+) (xcpV) [Acinetobacter haemolyticus strain 2126ch]
ATGGTGGCTTTGGCAATTTTTGCAGTGGCTGCAATCGCGCTAACAAAAATAGCCATGCAATATACGCAAGCAACCTCAAA
TGCAATTTTACGTACTAAGGCTCAATTTGTTGCAATGAATGAGGTTGCAATGATGGAGATTAACAAAGAGTGGTTGGATG
GAACCCAATCCAAACAAATCACTTCACAAGGTGAAACATGGCAAATTGATAAAAAAGCACAAGCAACGATTAGCCCCAAA
GTTCAGCGGATCGAATTACAAGTGAGTTTATTTAACGTTGATCAAGACAAAGTTGAAGCGGGTGTTGGTCATCTAGTGTT
TTTCAATCATCAGACTGAAAGTTAA
ATGGTGGCTTTGGCAATTTTTGCAGTGGCTGCAATCGCGCTAACAAAAATAGCCATGCAATATACGCAAGCAACCTCAAA
TGCAATTTTACGTACTAAGGCTCAATTTGTTGCAATGAATGAGGTTGCAATGATGGAGATTAACAAAGAGTGGTTGGATG
GAACCCAATCCAAACAAATCACTTCACAAGGTGAAACATGGCAAATTGATAAAAAAGCACAAGCAACGATTAGCCCCAAA
GTTCAGCGGATCGAATTACAAGTGAGTTTATTTAACGTTGATCAAGACAAAGTTGAAGCGGGTGTTGGTCATCTAGTGTT
TTTCAATCATCAGACTGAAAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
80 |
96.491 |
0.772 |