Detailed information NTG0313217

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Ahae2126ch_RS07665
• Genome accession: NZ_CP031991
• Coordinates: 1584455..1585174 (+)
• Length: 239 a.a.
• NCBI ID: WP_005080462.1
• Uniprot ID: C0VKX1
• Organism: Acinetobacter haemolyticus strain 2126ch
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1579455..1590174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Ahae2126ch_RS07630 (Ahae2126ch_07700)	-	1579733..1580716 (+)	984	WP_004639309.1	DNA polymerase III subunit delta'	-
Ahae2126ch_RS07635 (Ahae2126ch_07705)	-	1580860..1581168 (+)	309	WP_004639308.1	hypothetical protein	-
Ahae2126ch_RS07640 (Ahae2126ch_07710)	-	1581491..1581835 (+)	345	WP_004639306.1	PilZ domain-containing protein	-
Ahae2126ch_RS07645 (Ahae2126ch_07715)	-	1581856..1582629 (+)	774	WP_005080456.1	TatD family hydrolase	-
Ahae2126ch_RS07650 (Ahae2126ch_07720)	-	1582671..1583276 (+)	606	WP_017394545.1	TetR/AcrR family transcriptional regulator	-
Ahae2126ch_RS07655 (Ahae2126ch_07725)	-	1583291..1583902 (+)	612	WP_005080458.1	type II secretion system protein	-
Ahae2126ch_RS07660 (Ahae2126ch_07730)	xcpV	1584105..1584449 (+)	345	WP_042110486.1	type II secretion system protein	Machinery gene
Ahae2126ch_RS07665 (Ahae2126ch_07735)	xcpW	1584455..1585174 (+)	720	WP_005080462.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Ahae2126ch_RS07670 (Ahae2126ch_07740)	gspK	1585176..1586153 (+)	978	WP_004639300.1	type II secretion system minor pseudopilin GspK	-
Ahae2126ch_RS07675 (Ahae2126ch_07745)	-	1586239..1586835 (+)	597	WP_017394547.1	6-carboxytetrahydropterin synthase	-
Ahae2126ch_RS07680 (Ahae2126ch_07750)	ung	1586882..1587595 (+)	714	WP_005090364.1	uracil-DNA glycosylase	-
Ahae2126ch_RS07685 (Ahae2126ch_07755)	-	1587592..1588716 (+)	1125	WP_171055793.1	enoyl-CoA hydratase/isomerase family protein	-
Ahae2126ch_RS07690 (Ahae2126ch_07760)	tadA	1588721..1589233 (+)	513	WP_005080470.1	tRNA adenosine(34) deaminase TadA	-
Ahae2126ch_RS07695 (Ahae2126ch_07765)	-	1589301..1589741 (+)	441	WP_004639295.1	SRPBCC family protein	-

Sequence

Protein

• Length: 239 a.a.
• Molecular weight: 27659.68 Da
• Isoelectric Point: 9.4555

>NTDB_id=313217 Ahae2126ch_RS07665 WP_005080462.1 1584455..1585174(+) (xcpW) [Acinetobacter haemolyticus strain 2126ch]
MNNKNNNMQISKFHFVNPRTQSLAFRLAERSSSARLNRSSGFTLVELLVAIAIFAVLSMLGWKVFDYLLKVKDRNAEHEV
SLFALQDAYQQILRDSLQIIPLTANDGRQLQAALVLNDQVFMFSKAGVSDPLKQGLSPYERIEYRFDESQKRLYRLKYTN
LNIPNRVQPMSSVLLDNVERFKVSVFNPQELMQWPENNVDPENTAELRKLPLGLKIQLTVAGTDYEWIYRLIDRSQDSQ

Nucleotide

• Length: 720 bp

>NTDB_id=313217 Ahae2126ch_RS07665 WP_005080462.1 1584455..1585174(+) (xcpW) [Acinetobacter haemolyticus strain 2126ch]
ATGAATAATAAAAACAATAATATGCAAATCTCAAAGTTTCACTTTGTTAATCCTCGCACTCAAAGCCTAGCTTTTCGTCT
TGCGGAGCGGTCGAGCAGTGCTCGACTTAATCGCTCCTCAGGATTTACGTTGGTAGAGTTGCTGGTTGCAATTGCAATTT
TTGCAGTTCTTTCTATGTTAGGTTGGAAAGTATTTGATTATTTGTTAAAAGTGAAAGATCGAAATGCTGAACATGAAGTG
AGTTTGTTTGCATTACAAGACGCTTATCAGCAGATCTTGCGAGATAGTTTGCAGATCATCCCTTTAACAGCAAATGATGG
AAGGCAATTGCAAGCTGCATTGGTACTTAATGATCAGGTTTTTATGTTCAGTAAAGCTGGTGTTTCTGATCCGCTCAAGC
AAGGGCTGTCGCCATACGAGCGCATCGAATATCGTTTTGATGAGTCTCAAAAAAGACTATATCGATTGAAATACACAAAT
CTAAATATTCCAAATCGTGTGCAGCCGATGTCAAGTGTATTGTTGGATAATGTTGAGCGCTTTAAAGTATCTGTTTTCAA
TCCACAAGAGTTAATGCAGTGGCCTGAAAATAATGTAGATCCAGAAAACACGGCTGAATTAAGAAAGTTACCATTAGGAT
TGAAAATTCAATTGACTGTTGCTGGTACAGATTATGAGTGGATCTATCGTCTGATCGATCGTAGTCAGGATAGTCAATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (37-60)

• Type II secretion system (T2SS), protein J (T2SSJ) (94-223)

3D structure

• AlphaFold DB: C0VKX1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	71.564	88.285	0.632