Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | Ahae5227_RS08135 | Genome accession | NZ_CP031988 |
| Coordinates | 1671143..1671487 (+) | Length | 114 a.a. |
| NCBI ID | WP_042110486.1 | Uniprot ID | - |
| Organism | Acinetobacter haemolyticus strain 5227 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1666143..1676487
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ahae5227_RS08105 (Ahae5227_08215) | - | 1666771..1667754 (+) | 984 | WP_004639309.1 | DNA polymerase III subunit delta' | - |
| Ahae5227_RS08110 (Ahae5227_08220) | - | 1667898..1668206 (+) | 309 | WP_004639308.1 | hypothetical protein | - |
| Ahae5227_RS08115 (Ahae5227_08225) | - | 1668529..1668873 (+) | 345 | WP_004639306.1 | PilZ domain-containing protein | - |
| Ahae5227_RS08120 (Ahae5227_08230) | - | 1668894..1669667 (+) | 774 | WP_005080456.1 | TatD family hydrolase | - |
| Ahae5227_RS08125 (Ahae5227_08235) | - | 1669709..1670314 (+) | 606 | WP_017394545.1 | TetR/AcrR family transcriptional regulator | - |
| Ahae5227_RS08130 (Ahae5227_08240) | - | 1670329..1670940 (+) | 612 | WP_005080458.1 | type II secretion system protein | - |
| Ahae5227_RS08135 (Ahae5227_08245) | xcpV | 1671143..1671487 (+) | 345 | WP_042110486.1 | type II secretion system protein | Machinery gene |
| Ahae5227_RS08140 (Ahae5227_08250) | xcpW | 1671493..1672212 (+) | 720 | WP_005080462.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| Ahae5227_RS08145 (Ahae5227_08255) | gspK | 1672214..1673191 (+) | 978 | WP_004639300.1 | type II secretion system minor pseudopilin GspK | - |
| Ahae5227_RS08150 (Ahae5227_08260) | - | 1673277..1673873 (+) | 597 | WP_017394547.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| Ahae5227_RS08155 (Ahae5227_08265) | ung | 1673920..1674633 (+) | 714 | WP_005090364.1 | uracil-DNA glycosylase | - |
| Ahae5227_RS08160 (Ahae5227_08270) | - | 1674630..1675754 (+) | 1125 | WP_171055793.1 | enoyl-CoA hydratase/isomerase family protein | - |
| Ahae5227_RS08165 (Ahae5227_08275) | tadA | 1675759..1676271 (+) | 513 | WP_005080470.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12655.56 Da Isoelectric Point: 6.4632
>NTDB_id=313174 Ahae5227_RS08135 WP_042110486.1 1671143..1671487(+) (xcpV) [Acinetobacter haemolyticus strain 5227]
MVALAIFAVAAIALTKIAMQYTQATSNAILRTKAQFVAMNEVAMMEINKEWLDGTQSKQITSQGETWQIDKKAQATISPK
VQRIELQVSLFNVDQDKVEAGVGHLVFFNHQTES
MVALAIFAVAAIALTKIAMQYTQATSNAILRTKAQFVAMNEVAMMEINKEWLDGTQSKQITSQGETWQIDKKAQATISPK
VQRIELQVSLFNVDQDKVEAGVGHLVFFNHQTES
Nucleotide
Download Length: 345 bp
>NTDB_id=313174 Ahae5227_RS08135 WP_042110486.1 1671143..1671487(+) (xcpV) [Acinetobacter haemolyticus strain 5227]
ATGGTGGCTTTGGCAATTTTTGCAGTGGCTGCAATCGCGCTAACAAAAATAGCCATGCAATATACGCAAGCAACCTCAAA
TGCAATTTTACGTACTAAGGCTCAATTTGTTGCAATGAATGAGGTTGCAATGATGGAGATTAACAAAGAGTGGTTGGATG
GAACCCAATCCAAACAAATCACTTCACAAGGTGAAACATGGCAAATTGATAAAAAAGCACAAGCAACGATTAGCCCCAAA
GTTCAGCGGATCGAATTACAAGTGAGTTTATTTAACGTTGATCAAGACAAAGTTGAAGCGGGTGTTGGTCATCTAGTGTT
TTTCAATCATCAGACTGAAAGTTAA
ATGGTGGCTTTGGCAATTTTTGCAGTGGCTGCAATCGCGCTAACAAAAATAGCCATGCAATATACGCAAGCAACCTCAAA
TGCAATTTTACGTACTAAGGCTCAATTTGTTGCAATGAATGAGGTTGCAATGATGGAGATTAACAAAGAGTGGTTGGATG
GAACCCAATCCAAACAAATCACTTCACAAGGTGAAACATGGCAAATTGATAAAAAAGCACAAGCAACGATTAGCCCCAAA
GTTCAGCGGATCGAATTACAAGTGAGTTTATTTAACGTTGATCAAGACAAAGTTGAAGCGGGTGTTGGTCATCTAGTGTT
TTTCAATCATCAGACTGAAAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
80 |
96.491 |
0.772 |