Detailed information NTG0313175

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Ahae5227_RS08140
• Genome accession: NZ_CP031988
• Coordinates: 1671493..1672212 (+)
• Length: 239 a.a.
• NCBI ID: WP_005080462.1
• Uniprot ID: C0VKX1
• Organism: Acinetobacter haemolyticus strain 5227
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1666493..1677212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Ahae5227_RS08105 (Ahae5227_08215)	-	1666771..1667754 (+)	984	WP_004639309.1	DNA polymerase III subunit delta'	-
Ahae5227_RS08110 (Ahae5227_08220)	-	1667898..1668206 (+)	309	WP_004639308.1	hypothetical protein	-
Ahae5227_RS08115 (Ahae5227_08225)	-	1668529..1668873 (+)	345	WP_004639306.1	PilZ domain-containing protein	-
Ahae5227_RS08120 (Ahae5227_08230)	-	1668894..1669667 (+)	774	WP_005080456.1	TatD family hydrolase	-
Ahae5227_RS08125 (Ahae5227_08235)	-	1669709..1670314 (+)	606	WP_017394545.1	TetR/AcrR family transcriptional regulator	-
Ahae5227_RS08130 (Ahae5227_08240)	-	1670329..1670940 (+)	612	WP_005080458.1	type II secretion system protein	-
Ahae5227_RS08135 (Ahae5227_08245)	xcpV	1671143..1671487 (+)	345	WP_042110486.1	type II secretion system protein	Machinery gene
Ahae5227_RS08140 (Ahae5227_08250)	xcpW	1671493..1672212 (+)	720	WP_005080462.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Ahae5227_RS08145 (Ahae5227_08255)	gspK	1672214..1673191 (+)	978	WP_004639300.1	type II secretion system minor pseudopilin GspK	-
Ahae5227_RS08150 (Ahae5227_08260)	-	1673277..1673873 (+)	597	WP_017394547.1	6-pyruvoyl trahydropterin synthase family protein	-
Ahae5227_RS08155 (Ahae5227_08265)	ung	1673920..1674633 (+)	714	WP_005090364.1	uracil-DNA glycosylase	-
Ahae5227_RS08160 (Ahae5227_08270)	-	1674630..1675754 (+)	1125	WP_171055793.1	enoyl-CoA hydratase/isomerase family protein	-
Ahae5227_RS08165 (Ahae5227_08275)	tadA	1675759..1676271 (+)	513	WP_005080470.1	tRNA adenosine(34) deaminase TadA	-

Sequence

Protein

• Length: 239 a.a.
• Molecular weight: 27659.68 Da
• Isoelectric Point: 9.4555

>NTDB_id=313175 Ahae5227_RS08140 WP_005080462.1 1671493..1672212(+) (xcpW) [Acinetobacter haemolyticus strain 5227]
MNNKNNNMQISKFHFVNPRTQSLAFRLAERSSSARLNRSSGFTLVELLVAIAIFAVLSMLGWKVFDYLLKVKDRNAEHEV
SLFALQDAYQQILRDSLQIIPLTANDGRQLQAALVLNDQVFMFSKAGVSDPLKQGLSPYERIEYRFDESQKRLYRLKYTN
LNIPNRVQPMSSVLLDNVERFKVSVFNPQELMQWPENNVDPENTAELRKLPLGLKIQLTVAGTDYEWIYRLIDRSQDSQ

Nucleotide

• Length: 720 bp

>NTDB_id=313175 Ahae5227_RS08140 WP_005080462.1 1671493..1672212(+) (xcpW) [Acinetobacter haemolyticus strain 5227]
ATGAATAATAAAAACAATAATATGCAAATCTCAAAGTTTCACTTTGTTAATCCTCGCACTCAAAGCCTAGCTTTTCGTCT
TGCGGAGCGGTCGAGCAGTGCTCGACTTAATCGCTCCTCAGGATTTACGTTGGTTGAGTTGCTGGTTGCAATTGCAATTT
TTGCAGTTCTTTCTATGTTAGGTTGGAAAGTATTTGATTATTTGTTAAAAGTGAAAGATCGAAATGCTGAACATGAAGTG
AGTTTGTTTGCATTACAAGACGCTTATCAGCAGATCTTGCGAGATAGTTTGCAGATCATCCCTTTAACAGCAAATGATGG
AAGGCAATTGCAAGCTGCATTGGTACTTAATGATCAGGTTTTTATGTTCAGTAAAGCTGGTGTTTCTGATCCGCTCAAGC
AAGGGCTGTCGCCATACGAGCGCATCGAATATCGTTTTGATGAGTCTCAAAAAAGACTATATCGATTGAAATACACAAAT
CTAAATATTCCAAATCGTGTGCAGCCGATGTCAAGTGTATTGTTGGATAATGTTGAGCGCTTTAAAGTATCTGTTTTCAA
TCCACAAGAGTTAATGCAGTGGCCTGAAAATAATGTAGATCCAGAAAACACGGCTGAATTAAGAAAGTTACCATTAGGAT
TGAAAATTCAATTGACTGTTGCTGGTACAGATTATGAGTGGATCTATCGTCTGATCGATCGTAGTCAGGATAGTCAATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (37-60)

• Type II secretion system (T2SS), protein J (T2SSJ) (94-223)

3D structure

• AlphaFold DB: C0VKX1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	71.564	88.285	0.632